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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr10 | 100987366 | 100987535 | TRUE | OK | 536.0 | 0.00833 | 5.543e-08 | 7.397e-05 | 0.874 | 0.437 | 532.4 | 524.5 | 475.4 | 574.8 | 532.7 | 576.2 |
E002 | chr10 | 100987535 | 100987542 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.101 | 0.5837 | NA | NA | NA | 1.0 | 1.0 | 5.0 | 4.0 | 1.0 | 1.9 |
E003 | chr10 | 100987542 | 100987549 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.0661 | 0.2156 | NA | NA | NA | 1.0 | 1.0 | 5.0 | 5.0 | 2.0 | 2.9 |
E004 | chr10 | 100987549 | 100987554 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.5 | 0.0446 | 0.09786 | NA | NA | NA | 2.0 | 1.0 | 5.0 | 5.0 | 2.9 | 4.8 |
E005 | chr10 | 100987554 | 100987555 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.6 | 0.0431 | 0.06754 | NA | NA | NA | 2.0 | 1.0 | 5.0 | 6.0 | 2.9 | 4.8 |
E006 | chr10 | 100987555 | 100987557 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.0 | 0.0272 | 0.7668 | NA | NA | NA | 7.9 | 4.2 | 8.1 | 7.9 | 2.9 | 4.8 |
E007 | chr10 | 100987557 | 100987613 | TRUE | OK | 48.9 | 0.0277 | 0.9164 | 0.9804 | 0.081 | 0.040 | 56.2 | 53.2 | 60.4 | 50.6 | 20.6 | 52.2 |
E008 | chr10 | 100987613 | 100987794 | TRUE | OK | 170.9 | 0.0121 | 0.5734 | 0.8793 | 0.118 | 0.059 | 201.1 | 160.6 | 226.6 | 172.7 | 109.7 | 154.7 |
E009 | chr10 | 100987794 | 100987880 | TRUE | OK | 224.2 | 0.00734 | 0.7996 | 0.9498 | 0.040 | 0.020 | 267.2 | 227.3 | 294.1 | 209.5 | 151.8 | 195.3 |
E010 | chr10 | 100987880 | 100989187 | TRUE | OK | 797.2 | 0.0153 | 0.7794 | 0.9443 | -0.052 | -0.026 | 1025.4 | 787.3 | 1048.5 | 791.3 | 557.2 | 573.3 |
E011 | chr10 | 100989187 | 100989453 | TRUE | OK | 251.3 | 0.00377 | 0.03416 | 0.5707 | -0.273 | -0.136 | 324.4 | 288.8 | 340.4 | 226.4 | 168.4 | 159.5 |
E012 | chr10 | 100989643 | 100989676 | TRUE | OK | 144.7 | 0.00333 | 0.2223 | 0.7657 | -0.167 | -0.084 | 176.5 | 171.0 | 189.4 | 137.0 | 85.2 | 109.3 |
E013 | chr10 | 100989676 | 100989705 | TRUE | OK | 130.6 | 0.00446 | 0.1238 | 0.7193 | -0.231 | -0.115 | 163.7 | 154.3 | 174.2 | 125.1 | 72.5 | 93.8 |
E014 | chr10 | 100989705 | 100989774 | TRUE | OK | 154.6 | 0.00704 | 0.1594 | 0.7386 | -0.229 | -0.115 | 191.3 | 175.2 | 215.5 | 151.9 | 86.2 | 107.3 |
E015 | chr10 | 100989774 | 100989884 | TRUE | OK | 177.0 | 0.00671 | 0.3018 | 0.7919 | -0.158 | -0.079 | 224.8 | 195.0 | 234.7 | 177.7 | 105.8 | 123.8 |
E016 | chr10 | 100990435 | 100990543 | TRUE | OK | 133.5 | 0.0098 | 0.4932 | 0.8536 | -0.115 | -0.058 | 180.4 | 148.1 | 160.1 | 142.0 | 88.1 | 82.2 |
E017 | chr10 | 100990543 | 100990663 | TRUE | OK | 9.8 | 0.0157 | 0.1254 | 0.7205 | -0.697 | -0.348 | 11.8 | 12.5 | 17.1 | 6.0 | 4.9 | 6.8 |
E018 | chr10 | 100990868 | 100991010 | TRUE | OK | 163.4 | 0.00326 | 0.4446 | 0.8377 | -0.099 | -0.050 | 194.2 | 192.9 | 208.5 | 158.8 | 124.4 | 101.5 |
E019 | chr10 | 100991010 | 100991054 | TRUE | OK | 40.0 | 0.00543 | 0.5937 | 0.886 | -0.119 | -0.059 | 43.4 | 55.3 | 48.3 | 39.7 | 24.5 | 29.0 |
E020 | chr10 | 100991054 | 100991233 | TRUE | OK | 11.8 | 0.0574 | 0.7072 | 0.9221 | -0.218 | -0.109 | 8.9 | 17.7 | 18.1 | 4.0 | 9.8 | 12.6 |
E021 | chr10 | 100993189 | 100993363 | TRUE | OK | 185.8 | 0.00394 | 0.7364 | 0.9316 | -0.048 | -0.024 | 201.1 | 208.5 | 258.9 | 179.7 | 136.1 | 130.5 |
E022 | chr10 | 100993363 | 100993568 | TRUE | OK | 215.1 | 0.00259 | 0.05202 | 0.6303 | -0.234 | -0.117 | 248.5 | 279.4 | 282.0 | 192.6 | 156.7 | 131.5 |
E023 | chr10 | 100993568 | 100993580 | TRUE | OK | 115.9 | 0.00674 | 0.0494 | 0.6238 | -0.352 | -0.176 | 139.0 | 173.1 | 138.0 | 98.3 | 83.2 | 63.8 |
E024 | chr10 | 100993580 | 100994341 | TRUE | OK | 550.1 | 0.0246 | 0.03789 | 0.5857 | -0.590 | -0.295 | 560.1 | 957.2 | 683.9 | 421.9 | 364.3 | 313.3 |
E025 | chr10 | 100994341 | 100994401 | TRUE | OK | 27.1 | 0.039 | 0.04469 | 0.6093 | -0.888 | -0.444 | 28.6 | 60.5 | 29.2 | 16.9 | 16.6 | 10.6 |
E026 | chr10 | 100994401 | 100994403 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.117 | 0.1615 | NA | NA | NA | 1.0 | 2.1 | 3.0 | 0.0 | 1.0 | 0.0 |
J027 | chr10 | 100987557 | 100989705 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.113 | 0.1665 | NA | NA | NA | 1.0 | 1.0 | 4.0 | 0.0 | 0.0 | 1.0 |
J028 | chr10 | 100987613 | 100989643 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.5 | 0.0183 | 0.5781 | NA | NA | NA | 5.9 | 6.3 | 9.1 | 5.0 | 2.0 | 4.8 |
J029 | chr10 | 100987880 | 100989643 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.0663 | 0.04119 | NA | NA | NA | 0.0 | 2.1 | 0.0 | 2.0 | 2.0 | 2.9 |
J030 | chr10 | 100989453 | 100989643 | TRUE | OK | 102.4 | 0.00185 | 0.05056 | 0.6268 | -0.277 | -0.139 | 124.2 | 134.5 | 131.9 | 86.4 | 62.7 | 74.4 |
J031 | chr10 | 100989453 | 100989705 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.2 | 0.0533 | 0.07013 | NA | NA | NA | 0.0 | 1.0 | 3.0 | 5.0 | 2.0 | 1.9 |
J032 | chr10 | 100989676 | 100989774 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.555 | 0.4349 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
J033 | chr10 | 100989884 | 100990435 | TRUE | OK | 89.2 | 0.0178 | 0.9179 | 0.9807 | -0.017 | -0.009 | 132.1 | 85.5 | 100.7 | 98.3 | 58.8 | 59.9 |
J034 | chr10 | 100990543 | 100990868 | TRUE | OK | 80.8 | 0.00265 | 0.1858 | 0.7511 | -0.210 | -0.105 | 99.6 | 101.1 | 102.7 | 77.4 | 57.8 | 46.4 |
J035 | chr10 | 100990663 | 100990868 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.0544 | 0.373 | NA | NA | NA | 2.0 | 2.1 | 4.0 | 0.0 | 2.0 | 1.0 |
J036 | chr10 | 100991010 | 100993189 | TRUE | OK | 65.1 | 0.00393 | 0.6963 | 0.9187 | 0.072 | 0.036 | 69.0 | 75.1 | 82.6 | 65.5 | 58.8 | 39.6 |
J037 | chr10 | 100991054 | 100993189 | TRUE | OK | 26.8 | 0.0047 | 0.7817 | 0.945 | -0.070 | -0.035 | 28.6 | 34.4 | 34.2 | 27.8 | 16.6 | 19.3 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000107815.10 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |