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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr9 | 72351412 | 72351424 | TRUE | OK | 10.0 | 0.117 | 0.555 | 0.8732 | -0.314 | -0.157 | 7.9 | 13.6 | 5.0 | 11.9 | 18.6 | 2.9 |
E002 | chr9 | 72351424 | 72354457 | TRUE | OK | 702.0 | 0.00147 | 2.396e-10 | 6.196e-07 | 0.512 | 0.256 | 450.6 | 444.2 | 426.1 | 907.4 | 1039.0 | 944.6 |
E003 | chr9 | 72354457 | 72355832 | TRUE | OK | 5271.5 | 0.00719 | 0.2334 | 0.7703 | -0.170 | -0.085 | 4347.3 | 4277.2 | 4102.4 | 6038.1 | 6476.0 | 6387.9 |
E004 | chr9 | 72355832 | 72355954 | TRUE | OK | 1476.2 | 0.00262 | 0.7793 | 0.9443 | 0.020 | 0.010 | 1224.6 | 1013.5 | 1180.5 | 1785.0 | 1820.5 | 1833.1 |
E005 | chr9 | 72355954 | 72356101 | TRUE | OK | 1668.3 | 0.000997 | 0.719 | 0.9258 | 0.020 | 0.010 | 1350.8 | 1201.2 | 1312.4 | 2016.4 | 2117.2 | 2012.0 |
E006 | chr9 | 72356930 | 72356945 | TRUE | OK | 1086.2 | 0.000888 | 0.7961 | 0.9488 | 0.016 | 0.008 | 873.6 | 816.4 | 828.9 | 1289.6 | 1409.2 | 1299.4 |
E007 | chr9 | 72356945 | 72357056 | TRUE | OK | 1431.9 | 0.000971 | 0.634 | 0.899 | 0.028 | 0.014 | 1155.6 | 1033.3 | 1117.0 | 1674.8 | 1855.7 | 1754.8 |
E008 | chr9 | 72359417 | 72359521 | TRUE | OK | 1279.8 | 0.00391 | 0.05371 | 0.6342 | 0.203 | 0.102 | 1028.4 | 772.7 | 961.9 | 1566.6 | 1693.2 | 1656.2 |
E009 | chr9 | 72360109 | 72360221 | TRUE | OK | 1111.1 | 0.00605 | 0.1588 | 0.7384 | 0.178 | 0.089 | 888.4 | 656.9 | 874.3 | 1374.0 | 1408.2 | 1464.8 |
E010 | chr9 | 72360221 | 72360285 | TRUE | OK | 116.4 | 0.00401 | 0.0008902 | 0.1236 | 0.522 | 0.261 | 83.8 | 56.3 | 74.5 | 141.0 | 178.2 | 164.4 |
E011 | chr9 | 72360437 | 72360627 | TRUE | OK | 28.3 | 0.037 | 0.3411 | 0.8044 | 0.394 | 0.197 | 27.6 | 14.6 | 13.1 | 25.8 | 55.8 | 32.9 |
E012 | chr9 | 72360627 | 72360784 | TRUE | OK | 1120.3 | 0.0107 | 0.37 | 0.8135 | 0.138 | 0.069 | 942.6 | 619.4 | 916.6 | 1494.1 | 1471.9 | 1277.2 |
E013 | chr9 | 72360784 | 72360787 | TRUE | OK | 633.4 | 0.00854 | 0.6253 | 0.8963 | 0.077 | 0.039 | 526.5 | 385.8 | 519.7 | 852.8 | 868.6 | 646.8 |
E014 | chr9 | 72363469 | 72363606 | TRUE | OK | 451.6 | 0.00831 | 0.7337 | 0.9307 | 0.039 | 0.019 | 368.8 | 261.7 | 405.9 | 572.8 | 595.4 | 504.7 |
E015 | chr9 | 72363606 | 72364346 | TRUE | OK | 179.8 | 0.0201 | 0.7483 | 0.9347 | 0.055 | 0.027 | 152.8 | 88.6 | 168.2 | 179.7 | 245.8 | 243.6 |
E016 | chr9 | 72364461 | 72364592 | TRUE | OK | 61.9 | 0.0102 | 0.5402 | 0.869 | 0.150 | 0.075 | 45.4 | 36.5 | 53.4 | 64.5 | 102.8 | 68.6 |
E017 | chr9 | 72364592 | 72364626 | TRUE | OK | 14.5 | 0.0192 | 0.6589 | 0.9072 | 0.182 | 0.091 | 11.8 | 6.3 | 13.1 | 15.9 | 26.4 | 13.5 |
E018 | chr9 | 72364626 | 72364664 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.1 | 0.0206 | 0.8651 | NA | NA | NA | 5.9 | 4.2 | 8.1 | 9.9 | 13.7 | 6.8 |
E019 | chr9 | 72364695 | 72364976 | TRUE | OK | 1164.6 | 0.0359 | 0.6246 | 0.8961 | -0.102 | -0.051 | 1069.8 | 744.5 | 1007.2 | 1521.0 | 1821.5 | 823.7 |
E020 | chr9 | 72364976 | 72365208 | TRUE | OK | 828.2 | 0.0167 | 0.8941 | 0.9746 | -0.015 | -0.008 | 727.7 | 503.6 | 712.1 | 977.9 | 1290.7 | 757.0 |
E021 | chr9 | 72365208 | 72365235 | TRUE | OK | 57.3 | 0.0178 | 0.7288 | 0.9291 | -0.113 | -0.056 | 56.2 | 28.2 | 55.4 | 72.5 | 78.3 | 53.2 |
J022 | chr9 | 72356101 | 72356930 | TRUE | OK | 980.8 | 0.000794 | 0.9362 | 0.985 | 0.005 | 0.002 | 773.0 | 756.0 | 755.4 | 1164.5 | 1262.3 | 1173.7 |
J023 | chr9 | 72357056 | 72359417 | TRUE | OK | 836.1 | 0.00155 | 0.142 | 0.7311 | 0.112 | 0.056 | 683.3 | 547.4 | 634.6 | 982.9 | 1112.5 | 1055.8 |
J024 | chr9 | 72359521 | 72360109 | TRUE | OK | 792.5 | 0.00366 | 0.06914 | 0.6613 | 0.192 | 0.096 | 619.2 | 478.6 | 613.4 | 984.8 | 1018.5 | 1040.3 |
J025 | chr9 | 72360221 | 72360627 | TRUE | OK | 550.3 | 0.0134 | 0.1405 | 0.7302 | 0.270 | 0.135 | 435.8 | 277.4 | 434.1 | 716.8 | 672.8 | 764.8 |
J026 | chr9 | 72360784 | 72363469 | TRUE | OK | 22.9 | 0.00828 | 0.6772 | 0.9127 | -0.130 | -0.065 | 23.7 | 12.5 | 20.1 | 31.8 | 23.5 | 26.1 |
J027 | chr9 | 72360787 | 72363469 | TRUE | OK | 280.9 | 0.00844 | 0.2189 | 0.7644 | 0.194 | 0.097 | 194.2 | 161.6 | 247.8 | 351.4 | 354.5 | 376.1 |
J028 | chr9 | 72360787 | 72364461 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.0598 | 0.6678 | NA | NA | NA | 2.0 | 0.0 | 3.0 | 3.0 | 1.0 | 1.9 |
J029 | chr9 | 72360787 | 72364695 | TRUE | OK | 302.3 | 0.0358 | 0.6988 | 0.9195 | -0.071 | -0.035 | 288.9 | 198.1 | 238.7 | 439.8 | 440.7 | 207.9 |
J030 | chr9 | 72363606 | 72364461 | TRUE | OK | 11.0 | 0.0108 | 0.04575 | 0.613 | -0.788 | -0.394 | 10.8 | 13.6 | 10.1 | 6.9 | 13.7 | 10.6 |
J031 | chr9 | 72363606 | 72364695 | TRUE | OK | 139.7 | 0.0293 | 0.5956 | 0.8865 | -0.136 | -0.068 | 141.0 | 85.5 | 117.8 | 188.6 | 203.7 | 101.5 |
N032 | chr9 | 72360784 | 72364695 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.6 | 0.0321 | 0.05919 | NA | NA | NA | 11.8 | 8.3 | 8.1 | 6.0 | 13.7 | 3.9 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000107372.13 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |