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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr7 | 103297434 | 103297452 | TRUE | OK | 13.0 | 0.0161 | 0.6013 | 0.8885 | 0.197 | 0.098 | 16.8 | 8.3 | 11.1 | 10.9 | 14.7 | 16.4 |
E002 | chr7 | 103297452 | 103297453 | TRUE | OK | 13.5 | 0.0144 | 0.6792 | 0.9133 | 0.151 | 0.076 | 16.8 | 9.4 | 12.1 | 10.9 | 15.7 | 16.4 |
E003 | chr7 | 103297453 | 103297455 | TRUE | OK | 98.6 | 0.00682 | 0.1814 | 0.7494 | 0.236 | 0.118 | 104.5 | 69.9 | 95.7 | 104.2 | 111.6 | 105.4 |
E004 | chr7 | 103297455 | 103297456 | TRUE | OK | 101.9 | 0.00664 | 0.212 | 0.7622 | 0.217 | 0.108 | 107.5 | 73.0 | 100.7 | 107.2 | 114.6 | 108.3 |
E005 | chr7 | 103297456 | 103297558 | TRUE | OK | 940.2 | 0.012 | 0.4517 | 0.8399 | 0.129 | 0.065 | 1047.1 | 713.2 | 938.7 | 1079.2 | 881.4 | 981.3 |
E006 | chr7 | 103297558 | 103297953 | TRUE | OK | 14.9 | 0.0107 | 0.7172 | 0.9252 | -0.126 | -0.063 | 14.8 | 15.6 | 16.1 | 13.9 | 11.8 | 17.4 |
E007 | chr7 | 103298567 | 103298708 | TRUE | OK | 1378.7 | 0.00812 | 0.3326 | 0.8017 | 0.142 | 0.071 | 1484.9 | 1106.3 | 1366.8 | 1525.9 | 1351.4 | 1436.7 |
E008 | chr7 | 103299442 | 103299529 | TRUE | OK | 1409.6 | 0.00748 | 0.1879 | 0.7524 | 0.190 | 0.095 | 1500.7 | 1151.2 | 1342.6 | 1522.9 | 1372.0 | 1568.2 |
E009 | chr7 | 103299529 | 103299533 | TRUE | OK | 16.6 | 0.111 | 0.7766 | 0.9433 | -0.053 | -0.026 | 16.8 | 11.5 | 22.2 | 24.8 | 20.6 | 3.9 |
E010 | chr7 | 103300177 | 103300186 | TRUE | OK | 729.6 | 0.00509 | 0.2166 | 0.7636 | 0.157 | 0.079 | 775.0 | 627.7 | 669.8 | 821.0 | 675.7 | 808.3 |
E011 | chr7 | 103300186 | 103300307 | TRUE | OK | 1116.0 | 0.00361 | 0.1329 | 0.725 | 0.157 | 0.079 | 1176.3 | 952.0 | 1053.6 | 1225.1 | 1127.2 | 1162.1 |
E012 | chr7 | 103303841 | 103303985 | TRUE | OK | 1390.1 | 0.00319 | 0.02964 | 0.5509 | 0.216 | 0.108 | 1413.0 | 1193.9 | 1302.3 | 1515.0 | 1490.5 | 1426.1 |
E013 | chr7 | 103303985 | 103304040 | TRUE | OK | 1060.4 | 0.00498 | 0.09768 | 0.6966 | 0.200 | 0.100 | 1097.4 | 871.7 | 1014.3 | 1147.7 | 1146.7 | 1084.8 |
E014 | chr7 | 103304410 | 103304490 | TRUE | OK | 1125.7 | 0.00203 | 0.1981 | 0.7568 | 0.107 | 0.054 | 1128.0 | 998.9 | 1130.1 | 1222.1 | 1126.2 | 1148.6 |
E015 | chr7 | 103307595 | 103307708 | TRUE | OK | 1060.0 | 0.0024 | 0.7254 | 0.9279 | 0.031 | 0.016 | 1136.9 | 995.8 | 1002.2 | 1158.6 | 1021.4 | 1045.2 |
E016 | chr7 | 103308951 | 103309095 | TRUE | OK | 1165.0 | 0.00397 | 0.9209 | 0.9815 | -0.011 | -0.005 | 1164.5 | 1260.6 | 1062.6 | 1266.8 | 1066.4 | 1168.9 |
E017 | chr7 | 103309095 | 103309259 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.304 | 0.5785 | NA | NA | NA | 5.9 | 2.1 | 2.0 | 1.0 | 6.9 | 0.0 |
E018 | chr7 | 103310314 | 103310475 | TRUE | OK | 1231.6 | 0.00761 | 0.3731 | 0.8144 | -0.135 | -0.067 | 1223.6 | 1437.9 | 1151.3 | 1279.7 | 1053.7 | 1243.4 |
E019 | chr7 | 103310577 | 103311642 | TRUE | OK | 42.4 | 0.00788 | 0.469 | 0.8458 | -0.174 | -0.087 | 47.3 | 34.4 | 52.4 | 35.7 | 43.1 | 41.6 |
E020 | chr7 | 103311642 | 103311728 | TRUE | OK | 832.2 | 0.00711 | 0.2311 | 0.7696 | -0.176 | -0.088 | 806.6 | 984.3 | 823.9 | 858.8 | 687.5 | 832.4 |
E021 | chr7 | 103311728 | 103311807 | TRUE | OK | 34.3 | 0.0276 | 0.2137 | 0.7628 | -0.430 | -0.215 | 27.6 | 39.6 | 50.4 | 35.7 | 33.3 | 19.3 |
E022 | chr7 | 103311807 | 103311896 | TRUE | OK | 895.9 | 0.005 | 0.7683 | 0.9407 | -0.040 | -0.020 | 830.2 | 1013.5 | 862.2 | 926.3 | 833.4 | 909.8 |
E023 | chr7 | 103312055 | 103312131 | TRUE | OK | 701.8 | 0.00561 | 0.7528 | 0.9361 | 0.037 | 0.019 | 630.1 | 785.2 | 655.7 | 718.8 | 677.7 | 743.5 |
E024 | chr7 | 103312131 | 103312206 | TRUE | OK | 149.7 | 0.0135 | 0.9023 | 0.9767 | 0.016 | 0.008 | 138.0 | 184.6 | 121.9 | 142.0 | 172.4 | 139.2 |
E025 | chr7 | 103312206 | 103312312 | TRUE | OK | 549.4 | 0.00519 | 0.4548 | 0.8409 | 0.093 | 0.046 | 505.8 | 607.9 | 478.4 | 570.9 | 551.3 | 582.0 |
E026 | chr7 | 103312312 | 103312351 | TRUE | OK | 258.2 | 0.00557 | 0.9411 | 0.9861 | 0.007 | 0.003 | 254.4 | 296.1 | 218.6 | 280.0 | 239.9 | 260.1 |
E027 | chr7 | 103312351 | 103312365 | TRUE | OK | 112.3 | 0.00978 | 0.6044 | 0.8894 | -0.113 | -0.056 | 105.5 | 146.0 | 96.7 | 119.1 | 103.8 | 102.5 |
E028 | chr7 | 103312365 | 103312415 | TRUE | OK | 122.5 | 0.0108 | 0.3329 | 0.8018 | -0.209 | -0.105 | 117.3 | 164.7 | 109.8 | 120.1 | 118.5 | 104.4 |
E029 | chr7 | 103312415 | 103314686 | TRUE | OK | 681.7 | 0.00326 | 0.0005472 | 0.09377 | -0.371 | -0.186 | 710.9 | 827.9 | 728.2 | 611.6 | 601.3 | 610.1 |
E030 | chr7 | 103328930 | 103329511 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.0 | 0.0338 | 0.4168 | NA | NA | NA | 5.9 | 3.1 | 5.0 | 4.0 | 2.9 | 2.9 |
J031 | chr7 | 103297558 | 103298567 | TRUE | OK | 932.4 | 0.0119 | 0.4635 | 0.8439 | 0.125 | 0.063 | 1038.3 | 708.0 | 933.7 | 1067.2 | 875.5 | 971.7 |
J032 | chr7 | 103297953 | 103298567 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.5 | 0.0271 | 0.7759 | NA | NA | NA | 4.9 | 3.1 | 3.0 | 2.0 | 3.9 | 3.9 |
J033 | chr7 | 103298708 | 103299442 | TRUE | OK | 967.2 | 0.00802 | 0.1352 | 0.7264 | 0.224 | 0.112 | 1020.5 | 756.0 | 921.6 | 1042.4 | 956.8 | 1106.1 |
J034 | chr7 | 103299529 | 103300177 | TRUE | OK | 677.2 | 0.00407 | 0.1377 | 0.7283 | 0.172 | 0.086 | 711.9 | 585.0 | 616.4 | 757.5 | 636.5 | 756.1 |
J035 | chr7 | 103299533 | 103300177 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.257 | 0.2283 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
J036 | chr7 | 103299533 | 103300186 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.558 | 0.5451 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J037 | chr7 | 103300307 | 103303841 | TRUE | OK | 754.4 | 0.00341 | 0.05191 | 0.6301 | 0.204 | 0.102 | 796.7 | 634.0 | 680.9 | 828.0 | 793.2 | 793.8 |
J038 | chr7 | 103300307 | 103303985 | TRUE | OK | 12.0 | 0.079 | 0.1692 | 0.744 | 0.713 | 0.357 | 8.9 | 2.1 | 16.1 | 12.9 | 16.6 | 15.5 |
J039 | chr7 | 103304040 | 103304410 | TRUE | OK | 831.4 | 0.00419 | 0.07667 | 0.6735 | 0.201 | 0.100 | 836.1 | 675.7 | 819.9 | 899.5 | 892.1 | 865.3 |
J040 | chr7 | 103304490 | 103307595 | TRUE | OK | 631.0 | 0.00365 | 0.7017 | 0.9203 | 0.041 | 0.021 | 680.3 | 547.4 | 630.5 | 703.9 | 588.5 | 635.2 |
J041 | chr7 | 103304490 | 103308951 | TRUE | OK | 50.3 | 0.00593 | 0.008351 | 0.3664 | 0.559 | 0.280 | 30.6 | 44.8 | 46.3 | 62.5 | 51.9 | 65.7 |
J042 | chr7 | 103307708 | 103308951 | TRUE | OK | 652.0 | 0.00249 | 0.451 | 0.8398 | -0.073 | -0.037 | 667.5 | 718.4 | 604.3 | 695.0 | 604.2 | 622.6 |
J043 | chr7 | 103309095 | 103310314 | TRUE | OK | 733.9 | 0.00551 | 0.9195 | 0.9812 | 0.012 | 0.006 | 720.8 | 813.3 | 648.7 | 770.4 | 663.0 | 787.0 |
J044 | chr7 | 103310475 | 103311642 | TRUE | OK | 555.0 | 0.00832 | 0.07243 | 0.6664 | -0.289 | -0.144 | 567.9 | 695.5 | 543.9 | 557.0 | 428.9 | 536.6 |
J045 | chr7 | 103310475 | 103312206 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J046 | chr7 | 103311728 | 103311807 | TRUE | OK | 630.1 | 0.0072 | 0.616 | 0.8931 | -0.076 | -0.038 | 579.8 | 732.0 | 613.4 | 660.2 | 537.6 | 657.4 |
J047 | chr7 | 103311896 | 103312055 | TRUE | OK | 541.9 | 0.00433 | 0.4284 | 0.8325 | 0.094 | 0.047 | 482.2 | 590.2 | 497.6 | 571.8 | 523.9 | 585.9 |
J048 | chr7 | 103312131 | 103312206 | TRUE | OK | 396.2 | 0.00337 | 0.3105 | 0.7945 | 0.114 | 0.057 | 357.9 | 427.5 | 353.5 | 427.9 | 384.9 | 425.4 |
J049 | chr7 | 103312131 | 103328930 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.0871 | 0.0057 | NA | NA | NA | 1.0 | 3.1 | 3.0 | 0.0 | 0.0 | 0.0 |
N050 | chr7 | 103304490 | 103306402 | TRUE | OK | 11.2 | 0.118 | 0.3375 | 0.8032 | -0.640 | -0.320 | 5.9 | 16.7 | 18.1 | 3.0 | 8.8 | 14.5 |
N051 | chr7 | 103312643 | 103312946 | TRUE | OK | 217.6 | 0.0106 | 0.000216 | 0.05228 | -0.718 | -0.359 | 238.6 | 327.4 | 237.7 | 157.9 | 159.6 | 184.7 |
N052 | chr7 | 103313101 | 103315763 | TRUE | OK | 291.0 | 0.00148 | 0.0007387 | 0.1113 | -0.323 | -0.162 | 321.4 | 339.9 | 300.2 | 260.1 | 250.7 | 273.6 |
N053 | chr7 | 103315871 | 103315987 | TRUE | OK | 377.6 | 0.00346 | 9.7e-06 | 0.00538 | -0.518 | -0.259 | 420.0 | 493.2 | 402.9 | 336.6 | 295.7 | 317.1 |
N054 | chr7 | 103316088 | 103316829 | TRUE | OK | 438.3 | 0.0113 | 0.0001813 | 0.04659 | -0.716 | -0.358 | 466.4 | 662.1 | 477.4 | 353.4 | 323.2 | 347.1 |
N055 | chr7 | 103317014 | 103319608 | TRUE | OK | 486.3 | 0.0076 | 0.02061 | 0.4968 | -0.370 | -0.185 | 488.1 | 640.2 | 494.5 | 425.9 | 428.9 | 439.9 |
N056 | chr7 | 103319678 | 103319755 | TRUE | OK | 538.4 | 0.0136 | 0.04934 | 0.6236 | -0.415 | -0.207 | 522.6 | 752.8 | 541.9 | 445.8 | 483.8 | 483.4 |
N057 | chr7 | 103319844 | 103321931 | TRUE | OK | 563.1 | 0.0209 | 0.02342 | 0.5153 | -0.595 | -0.297 | 550.2 | 880.1 | 563.0 | 446.8 | 459.3 | 479.6 |
N058 | chr7 | 103322081 | 103322510 | TRUE | OK | 584.4 | 0.0215 | 0.01614 | 0.4596 | -0.638 | -0.319 | 567.9 | 925.9 | 596.3 | 468.6 | 452.4 | 495.0 |
N059 | chr7 | 103322632 | 103322702 | TRUE | OK | 336.7 | 0.00904 | 0.02126 | 0.5013 | -0.404 | -0.202 | 353.0 | 452.5 | 332.4 | 283.9 | 275.2 | 322.9 |
N060 | chr7 | 103322794 | 103323597 | TRUE | OK | 320.1 | 0.0235 | 0.01769 | 0.4734 | -0.673 | -0.337 | 313.6 | 533.9 | 317.3 | 249.2 | 241.9 | 264.9 |
N061 | chr7 | 103323663 | 103324481 | TRUE | OK | 306.0 | 0.0249 | 0.01762 | 0.4728 | -0.695 | -0.348 | 306.6 | 518.2 | 295.1 | 233.3 | 230.1 | 252.3 |
N062 | chr7 | 103324562 | 103326542 | TRUE | OK | 238.8 | 0.0146 | 0.001505 | 0.1647 | -0.714 | -0.357 | 270.2 | 377.5 | 232.7 | 188.6 | 177.2 | 186.6 |
N063 | chr7 | 103326684 | 103327331 | TRUE | OK | 49.8 | 0.0029 | 0.0005394 | 0.09294 | -0.664 | -0.332 | 61.1 | 62.6 | 58.4 | 44.7 | 35.3 | 36.7 |
N064 | chr7 | 103326684 | 103327655 | TRUE | OK | 294.4 | 0.00738 | 0.000326 | 0.06798 | -0.584 | -0.292 | 309.6 | 417.1 | 320.3 | 246.2 | 238.9 | 234.0 |
N065 | chr7 | 103327378 | 103327655 | TRUE | OK | 44.7 | 0.00468 | 0.0004358 | 0.08188 | -0.747 | -0.373 | 48.3 | 60.5 | 58.4 | 39.7 | 25.5 | 35.8 |
N066 | chr7 | 103327754 | 103337735 | TRUE | OK | 352.4 | 0.00122 | 2.279e-08 | 3.368e-05 | -0.488 | -0.244 | 386.5 | 425.4 | 406.9 | 312.7 | 293.8 | 289.1 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000105819.14 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |