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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr19 | 10251900 | 10251943 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.7 | 0.0799 | 0.4207 | NA | NA | NA | 2.0 | 1.0 | 1.0 | 3.0 | 2.0 | 1.0 |
E002 | chr19 | 10251943 | 10251963 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.3 | 0.0251 | 0.4407 | NA | NA | NA | 3.9 | 7.3 | 4.0 | 6.0 | 5.9 | 4.8 |
E003 | chr19 | 10251963 | 10251966 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.6 | 0.0175 | 0.1941 | NA | NA | NA | 5.9 | 10.4 | 7.1 | 8.9 | 7.8 | 11.6 |
E004 | chr19 | 10251966 | 10251997 | TRUE | OK | 33.8 | 0.0214 | 0.9064 | 0.9777 | 0.061 | 0.030 | 41.4 | 37.5 | 31.2 | 21.8 | 28.4 | 42.5 |
E005 | chr19 | 10251997 | 10252009 | TRUE | OK | 45.0 | 0.00979 | 0.7302 | 0.9295 | -0.073 | -0.036 | 55.2 | 53.2 | 44.3 | 30.8 | 38.2 | 48.3 |
E006 | chr19 | 10252009 | 10252145 | TRUE | OK | 230.1 | 0.0108 | 0.4508 | 0.8397 | -0.137 | -0.068 | 297.8 | 260.7 | 235.7 | 204.5 | 178.2 | 204.0 |
E007 | chr19 | 10252145 | 10252226 | TRUE | OK | 357.4 | 0.00782 | 0.411 | 0.8274 | 0.142 | 0.071 | 400.3 | 394.1 | 342.5 | 327.6 | 309.5 | 370.3 |
E008 | chr19 | 10252226 | 10252257 | TRUE | OK | 587.6 | 0.00302 | 0.6219 | 0.8951 | 0.059 | 0.029 | 620.2 | 700.7 | 597.3 | 540.1 | 513.1 | 554.0 |
E009 | chr19 | 10252257 | 10252275 | TRUE | OK | 659.1 | 0.00319 | 0.9469 | 0.9875 | -0.001 | -0.001 | 720.8 | 805.0 | 661.7 | 604.6 | 564.1 | 598.5 |
E010 | chr19 | 10252275 | 10252304 | TRUE | OK | 797.7 | 0.00344 | 0.7393 | 0.9325 | -0.030 | -0.015 | 868.7 | 985.4 | 812.8 | 740.6 | 672.8 | 705.8 |
E011 | chr19 | 10252304 | 10252310 | TRUE | OK | 778.4 | 0.00271 | 0.6554 | 0.9062 | -0.038 | -0.019 | 847.0 | 964.5 | 796.7 | 708.9 | 664.9 | 688.4 |
E012 | chr19 | 10252310 | 10252363 | TRUE | OK | 31.9 | 0.0105 | 0.4389 | 0.8358 | -0.216 | -0.108 | 24.7 | 45.9 | 42.3 | 26.8 | 24.5 | 27.1 |
E013 | chr19 | 10252363 | 10252396 | TRUE | OK | 23.3 | 0.0237 | 0.559 | 0.8743 | -0.197 | -0.099 | 30.6 | 32.3 | 19.1 | 23.8 | 23.5 | 10.6 |
E014 | chr19 | 10252396 | 10252463 | TRUE | OK | 1114.3 | 0.00371 | 0.9723 | 0.9934 | 0.006 | 0.003 | 1216.7 | 1319.0 | 1155.3 | 1017.6 | 1000.8 | 976.5 |
E015 | chr19 | 10252463 | 10252550 | TRUE | OK | 38.6 | 0.0775 | 0.1365 | 0.7275 | -0.659 | -0.330 | 58.2 | 60.5 | 34.2 | 29.8 | 40.2 | 8.7 |
E016 | chr19 | 10252550 | 10252701 | TRUE | OK | 1544.2 | 0.00288 | 0.4203 | 0.8302 | 0.085 | 0.042 | 1650.6 | 1857.1 | 1521.9 | 1413.7 | 1416.0 | 1405.8 |
E017 | chr19 | 10252701 | 10253029 | TRUE | OK | 33.8 | 0.00858 | 0.2659 | 0.7811 | -0.274 | -0.137 | 39.4 | 39.6 | 42.3 | 19.9 | 30.4 | 30.9 |
E018 | chr19 | 10254588 | 10254619 | TRUE | OK | 1117.4 | 0.00323 | 0.008776 | 0.374 | 0.274 | 0.137 | 1162.5 | 1279.4 | 1019.3 | 1079.2 | 1081.1 | 1082.9 |
E019 | chr19 | 10254619 | 10254640 | TRUE | OK | 1128.1 | 0.00335 | 0.003611 | 0.2543 | 0.310 | 0.155 | 1151.7 | 1276.3 | 1035.4 | 1084.1 | 1089.9 | 1131.2 |
E020 | chr19 | 10254640 | 10255717 | TRUE | OK | 27.4 | 0.00884 | 0.2154 | 0.7633 | 0.349 | 0.175 | 22.7 | 26.1 | 32.2 | 26.8 | 32.3 | 24.2 |
E021 | chr19 | 10256707 | 10256825 | TRUE | OK | 1731.6 | 0.00228 | 0.00686 | 0.3373 | 0.241 | 0.121 | 1737.3 | 2036.4 | 1689.1 | 1661.9 | 1638.3 | 1626.2 |
E022 | chr19 | 10258221 | 10258234 | TRUE | OK | 1231.9 | 0.000925 | 0.003214 | 0.242 | 0.191 | 0.096 | 1221.7 | 1483.8 | 1198.6 | 1162.6 | 1192.8 | 1132.2 |
E023 | chr19 | 10258234 | 10258328 | TRUE | OK | 1608.8 | 0.0009 | 0.006207 | 0.324 | 0.172 | 0.086 | 1593.4 | 1954.1 | 1596.4 | 1483.2 | 1557.1 | 1468.6 |
E024 | chr19 | 10258412 | 10258522 | TRUE | OK | 1448.8 | 0.000944 | 0.5913 | 0.8851 | -0.035 | -0.017 | 1475.1 | 1903.0 | 1465.5 | 1295.6 | 1290.7 | 1262.7 |
E025 | chr19 | 10258522 | 10258608 | TRUE | OK | 84.5 | 0.00434 | 0.0009315 | 0.1269 | -0.571 | -0.286 | 96.6 | 132.4 | 98.7 | 52.6 | 54.8 | 71.5 |
E026 | chr19 | 10258608 | 10258623 | TRUE | OK | 871.5 | 0.00128 | 0.1682 | 0.7433 | -0.105 | -0.053 | 891.4 | 1193.9 | 884.3 | 767.4 | 755.0 | 736.7 |
E027 | chr19 | 10258623 | 10258667 | TRUE | OK | 1011.9 | 0.00102 | 0.2863 | 0.7871 | -0.074 | -0.037 | 1043.2 | 1372.2 | 1004.2 | 881.6 | 913.7 | 856.6 |
E028 | chr19 | 10258667 | 10258685 | TRUE | OK | 961.9 | 0.001 | 0.5277 | 0.8648 | -0.044 | -0.022 | 998.8 | 1287.8 | 940.7 | 835.9 | 881.4 | 826.6 |
E029 | chr19 | 10258685 | 10259042 | TRUE | OK | 303.0 | 0.00273 | 0.01158 | 0.4114 | -0.287 | -0.143 | 322.4 | 448.4 | 318.3 | 219.4 | 248.7 | 261.0 |
E030 | chr19 | 10259042 | 10259125 | TRUE | OK | 68.7 | 0.00521 | 0.02096 | 0.4987 | -0.431 | -0.216 | 84.8 | 93.8 | 78.6 | 53.6 | 42.1 | 59.0 |
E031 | chr19 | 10259171 | 10259616 | TRUE | OK | 195.3 | 0.00286 | 0.322 | 0.7986 | -0.116 | -0.058 | 214.0 | 237.7 | 218.6 | 174.7 | 165.5 | 161.5 |
E032 | chr19 | 10259616 | 10259778 | TRUE | OK | 1158.7 | 0.00343 | 0.4238 | 0.831 | -0.099 | -0.050 | 1179.3 | 1661.1 | 1094.9 | 996.8 | 1038.0 | 982.3 |
E033 | chr19 | 10259778 | 10260025 | TRUE | OK | 853.1 | 0.00461 | 0.4739 | 0.8474 | -0.107 | -0.054 | 838.1 | 1264.8 | 805.8 | 720.8 | 764.8 | 724.2 |
E034 | chr19 | 10260025 | 10260043 | TRUE | OK | 40.1 | 0.0192 | 0.003556 | 0.2527 | -0.909 | -0.454 | 36.5 | 77.2 | 54.4 | 18.9 | 32.3 | 21.3 |
E035 | chr19 | 10260043 | 10260045 | TRUE | OK | 32.4 | 0.0076 | 3.285e-05 | 0.01366 | -1.112 | -0.556 | 34.5 | 59.4 | 47.3 | 16.9 | 20.6 | 15.5 |
J036 | chr19 | 10252009 | 10252145 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.16 | 0.4394 | NA | NA | NA | 2.0 | 0.0 | 1.0 | 0.0 | 0.0 | 1.0 |
J037 | chr19 | 10252310 | 10252363 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.687 | 0.7545 | NA | NA | NA | 0.0 | 2.1 | 0.0 | 0.0 | 0.0 | 2.9 |
J038 | chr19 | 10252310 | 10252396 | TRUE | OK | 768.6 | 0.00236 | 0.6319 | 0.8983 | -0.039 | -0.019 | 838.1 | 947.8 | 789.7 | 699.9 | 659.1 | 676.8 |
J039 | chr19 | 10252463 | 10252550 | TRUE | OK | 906.7 | 0.00367 | 0.6419 | 0.9017 | -0.042 | -0.021 | 1015.6 | 1084.4 | 939.7 | 825.0 | 793.2 | 782.2 |
J040 | chr19 | 10252701 | 10254588 | TRUE | OK | 976.5 | 0.00281 | 0.02059 | 0.4967 | 0.231 | 0.116 | 1027.4 | 1126.1 | 898.4 | 931.2 | 936.2 | 939.8 |
J041 | chr19 | 10254640 | 10256707 | TRUE | OK | 990.9 | 0.00231 | 0.0006544 | 0.1039 | 0.313 | 0.156 | 987.0 | 1130.3 | 913.6 | 954.1 | 954.8 | 1005.5 |
J042 | chr19 | 10254640 | 10258221 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.265 | 0.1005 | NA | NA | NA | 7.9 | 3.1 | 1.0 | 2.0 | 0.0 | 0.0 |
J043 | chr19 | 10256825 | 10258221 | TRUE | OK | 1132.3 | 0.000974 | 0.005112 | 0.299 | 0.187 | 0.094 | 1119.1 | 1352.4 | 1116.0 | 1078.2 | 1072.3 | 1055.8 |
J044 | chr19 | 10258328 | 10258412 | TRUE | OK | 961.3 | 0.000891 | 0.4453 | 0.8379 | 0.052 | 0.026 | 948.5 | 1209.6 | 990.1 | 838.9 | 894.1 | 886.6 |
J045 | chr19 | 10258522 | 10258608 | TRUE | OK | 737.5 | 0.00131 | 0.3563 | 0.8096 | -0.073 | -0.037 | 754.3 | 1004.1 | 736.3 | 672.1 | 637.5 | 620.7 |
J046 | chr19 | 10258685 | 10259171 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.9 | 0.0428 | 0.7962 | NA | NA | NA | 12.8 | 6.3 | 9.1 | 6.9 | 5.9 | 12.6 |
J047 | chr19 | 10258685 | 10259616 | TRUE | OK | 664.5 | 0.00157 | 0.4616 | 0.8433 | -0.067 | -0.034 | 677.4 | 931.1 | 636.6 | 582.8 | 599.3 | 559.8 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000105364.13 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |