Normalized Counts Table (ENSG00000104419.14)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr8	133237170	133237175	TRUE	OK	26.1	0.0235	0.4755	0.848	-0.265	-0.133	18.7	37.5	21.2	20.8	28.4	30.0
E002	chr8	133237175	133237529	TRUE	OK	2674.9	0.0151	0.1875	0.7521	-0.300	-0.150	2161.3	3358.6	2337.8	2851.3	2614.7	2725.5
E003	chr8	133237529	133238537	TRUE	OK	6447.0	0.00346	0.299	0.7915	-0.103	-0.051	5573.9	6398.1	5715.0	7428.1	6344.8	7222.3
E004	chr8	133238537	133238697	TRUE	OK	1836.3	0.00337	0.6068	0.8902	0.055	0.028	1700.9	1534.9	1599.5	2253.6	1857.7	2071.0
E005	chr8	133238697	133238766	TRUE	OK	1150.8	0.00199	0.7766	0.9433	-0.021	-0.011	1076.7	1009.4	1024.3	1370.0	1159.5	1264.6
E006	chr8	133238766	133239071	TRUE	OK	2122.2	0.0022	0.886	0.9726	0.011	0.006	1892.2	1840.4	1939.9	2432.3	2357.1	2271.1
E007	chr8	133239071	133239119	TRUE	OK	1326.1	0.00501	0.4795	0.8492	0.084	0.042	1201.0	1039.6	1212.7	1559.7	1516.9	1427.1
E008	chr8	133239119	133241527	TRUE	OK	178.3	0.0203	0.09951	0.6976	0.410	0.205	136.1	101.1	168.2	183.7	221.3	259.1
E009	chr8	133241873	133241877	TRUE	OK	14.6	0.125	0.4556	0.8413	0.354	0.177	20.7	2.1	11.1	17.9	12.7	23.2
E010	chr8	133241877	133242022	TRUE	OK	22.2	0.0579	0.3827	0.8179	0.374	0.187	26.6	7.3	17.1	24.8	21.5	35.8
E011	chr8	133242022	133242056	TRUE	OK	1302.6	0.00329	0.5214	0.8627	0.063	0.032	1161.5	1055.2	1200.6	1506.1	1461.1	1430.9
E012	chr8	133242056	133242074	TRUE	OK	1238.4	0.00301	0.6329	0.8986	0.046	0.023	1111.2	1018.7	1139.2	1443.5	1380.8	1337.1
E013	chr8	133244354	133244379	TRUE	OK	1395.8	0.00209	0.7115	0.9234	0.030	0.015	1259.1	1173.1	1273.1	1624.2	1515.9	1529.5
E014	chr8	133244379	133244390	TRUE	OK	1343.3	0.00163	0.9429	0.9865	0.006	0.003	1209.8	1149.1	1237.9	1567.6	1428.8	1466.7
E015	chr8	133244390	133244503	TRUE	OK	19.7	0.0259	0.4013	0.8244	-0.326	-0.163	18.7	13.6	27.2	19.9	24.5	14.5
E016	chr8	133244503	133244660	TRUE	OK	13.1	0.133	0.4946	0.8539	0.319	0.159	15.8	1.0	14.1	13.9	14.7	19.3
E017	chr8	133246615	133246622	TRUE	OK	1329.5	0.00163	0.8384	0.9602	-0.015	-0.008	1206.9	1143.9	1234.9	1543.8	1399.4	1448.3
E018	chr8	133246622	133246626	TRUE	OK	1304.8	0.00174	0.8432	0.9614	-0.015	-0.007	1190.1	1119.9	1208.7	1523.9	1366.1	1420.3
E019	chr8	133246626	133246663	TRUE	OK	1701.5	0.00183	0.4679	0.8454	0.056	0.028	1505.6	1419.1	1553.1	1977.6	1819.5	1933.7
E020	chr8	133247874	133247926	TRUE	OK	1573.2	0.00168	0.486	0.8516	0.053	0.027	1406.0	1326.3	1411.1	1832.7	1642.3	1820.6
E021	chr8	133248714	133248771	TRUE	OK	1687.3	0.00209	0.4585	0.8424	0.062	0.031	1509.6	1407.7	1514.9	1950.8	1764.7	1976.2
E022	chr8	133249328	133249488	FALSE	LOW_COUNTS_INDEP_FILTER	7.1	0.0242	0.0057	NA	NA	NA	2.0	3.1	4.0	7.9	11.8	13.5
E023	chr8	133250439	133250460	TRUE	OK	1406.2	0.00381	0.2772	0.7839	0.118	0.059	1272.9	1106.3	1239.9	1654.0	1477.7	1686.2
E024	chr8	133250460	133250543	TRUE	OK	1866.0	0.00457	0.3206	0.7981	0.114	0.057	1706.8	1449.4	1658.9	2217.9	1982.1	2181.2
E025	chr8	133254538	133254595	TRUE	OK	1404.3	0.00438	0.3059	0.7933	0.118	0.059	1273.9	1088.6	1251.0	1714.5	1458.1	1639.8
E026	chr8	133254595	133254882	TRUE	OK	57.4	0.00433	3.066e-05	0.01296	0.822	0.411	31.6	44.8	32.2	79.4	78.3	78.3
E027	chr8	133254882	133255269	TRUE	OK	28.3	0.0218	0.05376	0.6344	0.662	0.331	24.7	16.7	16.1	27.8	36.2	48.3
E028	chr8	133255269	133255400	TRUE	OK	25.1	0.00813	0.038	0.5862	0.593	0.296	19.7	13.6	19.1	29.8	35.3	32.9
E029	chr8	133255400	133256228	TRUE	OK	54.8	0.0121	0.0003478	0.07082	0.893	0.447	39.4	25.0	35.3	65.5	84.2	79.3
E030	chr8	133256776	133256784	TRUE	OK	1186.4	0.00365	0.4445	0.8377	0.084	0.042	1057.0	947.8	1083.8	1456.4	1194.7	1378.7
E031	chr8	133256784	133256808	TRUE	OK	1220.0	0.00455	0.6901	0.9168	0.050	0.025	1107.3	976.0	1132.1	1504.1	1201.6	1399.0
E032	chr8	133256808	133256815	TRUE	OK	1032.1	0.0041	0.9322	0.984	-0.006	-0.003	950.5	851.9	972.0	1260.8	996.9	1160.2
E033	chr8	133256815	133256818	TRUE	OK	1010.8	0.00454	0.9365	0.9851	-0.007	-0.003	943.6	821.7	952.8	1231.1	985.2	1130.2
E034	chr8	133256818	133256839	TRUE	OK	1053.4	0.00471	0.9384	0.9854	-0.007	-0.004	989.0	852.9	991.1	1276.7	1027.3	1183.4
E035	chr8	133256839	133256863	TRUE	OK	1072.3	0.00701	0.8906	0.9738	0.021	0.011	1014.6	829.0	1011.3	1335.3	1042.9	1200.8
E036	chr8	133258365	133258378	TRUE	OK	1093.3	0.00797	0.448	0.839	0.114	0.057	1020.5	798.7	995.1	1393.9	1136.9	1214.3
E037	chr8	133258378	133258415	TRUE	OK	1237.8	0.00878	0.384	0.8184	0.134	0.067	1153.6	881.1	1130.1	1550.7	1300.5	1410.6
E038	chr8	133258415	133258426	TRUE	OK	977.5	0.00932	0.2223	0.7657	0.198	0.099	889.4	671.5	877.3	1259.8	1022.4	1144.7
E039	chr8	133258995	133259094	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.582	0.8613	NA	NA	NA	0.0	2.1	0.0	2.0	0.0	0.0
E040	chr8	133259094	133259167	FALSE	LOW_COUNTS_INDEP_FILTER	8.6	0.0172	0.7774	NA	NA	NA	5.9	8.3	10.1	10.9	8.8	7.7
E041	chr8	133259167	133259217	TRUE	OK	1091.2	0.00688	0.2796	0.7849	0.153	0.077	984.0	794.6	990.1	1384.9	1130.1	1263.7
E042	chr8	133259217	133259230	TRUE	OK	943.9	0.00772	0.2286	0.7685	0.178	0.089	868.7	667.3	835.0	1184.4	999.8	1108.0
E043	chr8	133259402	133259446	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.398	0.8716	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	1.0
E044	chr8	133262046	133262059	TRUE	OK	1041.6	0.00575	0.1744	0.7461	0.177	0.088	944.6	762.2	912.5	1292.6	1118.3	1219.2
E045	chr8	133262059	133262167	TRUE	OK	1549.8	0.00764	0.1551	0.7368	0.206	0.103	1386.3	1092.8	1386.9	1911.1	1719.6	1802.2
E046	chr8	133262167	133262257	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.155	0.3088	NA	NA	NA	1.0	0.0	0.0	1.0	2.0	1.0
E047	chr8	133264546	133264581	TRUE	OK	1279.3	0.00883	0.1767	0.7472	0.208	0.104	1183.2	885.3	1115.0	1547.8	1421.9	1522.8
E048	chr8	133264581	133264652	TRUE	OK	1401.2	0.0105	0.1913	0.7542	0.219	0.109	1287.7	944.7	1242.9	1741.4	1497.3	1692.9
E049	chr8	133264652	133264992	TRUE	OK	39.9	0.0638	0.3039	0.7926	-0.393	-0.197	44.4	31.3	47.3	56.6	43.1	16.4
E050	chr8	133280231	133280267	TRUE	OK	1118.0	0.0107	0.2039	0.7593	0.216	0.108	1012.6	748.7	1010.2	1374.0	1173.2	1389.3
E051	chr8	133280960	133281055	FALSE	LOW_COUNTS_INDEP_FILTER	1.4	0.499	0.9626	NA	NA	NA	0.0	4.2	0.0	2.0	2.0	0.0
E052	chr8	133284248	133284263	TRUE	OK	1073.4	0.00981	0.2029	0.7589	0.210	0.105	974.2	730.9	960.9	1328.4	1114.4	1331.3
E053	chr8	133284263	133284275	TRUE	OK	995.3	0.00842	0.2136	0.7628	0.193	0.096	891.4	694.5	901.5	1251.9	1026.3	1206.6
E054	chr8	133284275	133284329	TRUE	OK	1040.5	0.00816	0.1978	0.7567	0.196	0.098	925.9	726.8	944.8	1306.5	1082.1	1256.9
E055	chr8	133284756	133284896	FALSE	LOW_COUNTS_INDEP_FILTER	2.6	0.0535	0.01402	NA	NA	NA	2.0	0.0	0.0	5.0	3.9	4.8
E056	chr8	133288259	133288431	FALSE	LOW_COUNTS_INDEP_FILTER	2.8	0.0528	0.5229	NA	NA	NA	1.0	2.1	3.0	2.0	4.9	3.9
E057	chr8	133296497	133296503	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.341	0.4002	NA	NA	NA	1.0	0.0	3.0	0.0	0.0	1.9
E058	chr8	133296503	133296536	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.835	0.8764	NA	NA	NA	3.0	0.0	0.0	0.0	0.0	2.9
E059	chr8	133296536	133296555	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.258	0.5299	NA	NA	NA	2.0	1.0	0.0	0.0	0.0	1.9
E060	chr8	133296736	133297003	FALSE	LOW_COUNTS_INDEP_FILTER	4.8	0.0422	0.709	NA	NA	NA	6.9	1.0	6.0	5.0	3.9	5.8
E061	chr8	133297003	133297092	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.415	0.822	NA	NA	NA	1.0	0.0	5.0	0.0	2.9	5.8
E062	chr8	133297092	133297133	TRUE	OK	12.5	0.0983	0.4979	0.855	0.422	0.211	4.9	7.3	16.1	6.9	22.5	17.4
E063	chr8	133297133	133297237	TRUE	OK	720.1	0.00653	0.09416	0.6927	0.235	0.118	617.2	502.6	647.6	904.4	763.8	884.7
E064	chr8	133297237	133297239	TRUE	OK	109.2	0.0138	0.3152	0.7961	0.214	0.107	95.6	63.6	109.8	136.0	116.5	133.4
E065	chr8	133297239	133297252	TRUE	OK	75.7	0.0104	0.6981	0.9192	0.081	0.040	67.0	50.1	79.6	84.4	75.4	97.7
E066	chr8	133297252	133297256	FALSE	LOW_COUNTS_INDEP_FILTER	3.0	0.0566	0.9821	NA	NA	NA	4.9	1.0	2.0	4.0	3.9	1.9
E067	chr8	133297256	133297304	FALSE	LOW_COUNTS_INDEP_FILTER	2.6	0.12	0.9596	NA	NA	NA	4.9	1.0	1.0	4.0	3.9	1.0
E068	chr8	133297304	133297586	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.104	0.9659	NA	NA	NA	2.0	1.0	1.0	2.0	2.9	0.0
E069	chr8	133297742	133297958	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.0723	0.08289	NA	NA	NA	2.0	3.1	3.0	2.0	0.0	1.0
E070	chr8	133298377	133298458	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E071	chr8	133301987	133302022	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J072	chr8	133237529	133239071	TRUE	OK	13.9	0.00959	0.1144	0.7118	-0.559	-0.280	18.7	15.6	11.1	12.9	9.8	15.5
J073	chr8	133239119	133242022	TRUE	OK	1097.7	0.00488	0.4939	0.8537	0.080	0.040	1006.7	855.0	999.2	1267.8	1259.4	1197.9
J074	chr8	133242056	133284275	FALSE	LOW_COUNTS_INDEP_FILTER	2.7	0.348	0.7284	NA	NA	NA	0.0	3.1	5.0	6.0	0.0	1.9
J075	chr8	133242074	133244354	TRUE	OK	1161.7	0.0026	0.6962	0.9187	0.035	0.017	1037.3	958.3	1082.8	1340.3	1292.6	1258.8
J076	chr8	133244390	133246615	TRUE	OK	1295.9	0.0012	0.8303	0.9578	-0.014	-0.007	1176.3	1116.8	1200.6	1499.1	1366.1	1416.4
J077	chr8	133246663	133247874	TRUE	OK	1328.7	0.000989	0.1646	0.7416	0.088	0.044	1152.6	1119.9	1183.5	1542.8	1406.2	1567.2
J078	chr8	133246663	133284263	FALSE	LOW_COUNTS_INDEP_FILTER	3.1	0.035	0.8899	NA	NA	NA	2.0	2.1	4.0	2.0	2.9	5.8
J079	chr8	133247926	133248714	TRUE	OK	1298.5	0.0011	0.716	0.9248	0.025	0.013	1156.6	1126.1	1170.4	1488.2	1328.9	1520.8
J080	chr8	133248771	133249328	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J081	chr8	133248771	133250439	TRUE	OK	1306.2	0.00276	0.1958	0.7562	0.122	0.061	1159.5	1038.5	1157.3	1520.0	1388.6	1573.0
J082	chr8	133250543	133254538	TRUE	OK	1152.2	0.00555	0.2155	0.7633	0.157	0.079	1062.9	854.0	1003.2	1389.9	1235.9	1367.1
J083	chr8	133254595	133255269	FALSE	LOW_COUNTS_INDEP_FILTER	6.8	0.0159	0.387	NA	NA	NA	4.9	6.3	4.0	6.0	8.8	10.6
J084	chr8	133254595	133256776	TRUE	OK	1142.6	0.00319	0.4174	0.8293	0.085	0.042	1008.7	916.6	1048.5	1399.8	1145.8	1336.2
J085	chr8	133255400	133256776	FALSE	LOW_COUNTS_INDEP_FILTER	4.6	0.0259	0.06182	NA	NA	NA	3.0	1.0	3.0	6.9	3.9	9.7
J086	chr8	133256863	133258365	TRUE	OK	935.2	0.00773	0.6496	0.9043	0.069	0.035	883.5	698.6	864.2	1189.4	926.4	1049.0
J087	chr8	133256863	133259167	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.262	0.8667	NA	NA	NA	0.0	1.0	0.0	1.0	0.0	0.0
J088	chr8	133258426	133259167	TRUE	OK	884.9	0.00903	0.2338	0.7705	0.190	0.095	810.5	610.0	791.7	1132.8	920.5	1044.2
J089	chr8	133259230	133259402	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J090	chr8	133259230	133262046	TRUE	OK	904.8	0.00614	0.1668	0.7426	0.187	0.093	814.4	650.7	799.7	1140.7	955.8	1067.4
J091	chr8	133262167	133264546	TRUE	OK	1037.0	0.00855	0.1679	0.7432	0.210	0.105	943.6	711.1	920.6	1242.0	1167.3	1237.6
J092	chr8	133262167	133280231	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.56	0.6687	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J093	chr8	133264652	133280231	TRUE	OK	988.5	0.0117	0.1486	0.7342	0.258	0.129	896.3	642.3	871.2	1234.0	1041.0	1246.3
J094	chr8	133264652	133297133	FALSE	LOW_COUNTS_INDEP_FILTER	3.8	0.121	0.8345	NA	NA	NA	4.9	0.0	6.0	4.0	2.0	5.8
J095	chr8	133280267	133280960	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J096	chr8	133280267	133284248	TRUE	OK	923.1	0.0112	0.2821	0.7856	0.188	0.094	853.9	622.5	834.0	1124.8	944.0	1159.2
J097	chr8	133280267	133297133	FALSE	LOW_COUNTS_INDEP_FILTER	6.2	0.138	0.1393	NA	NA	NA	3.0	0.0	7.1	5.0	11.8	10.6
J098	chr8	133281055	133284248	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J099	chr8	133284329	133284756	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.0588	0.14	NA	NA	NA	2.0	0.0	0.0	3.0	2.9	1.9
J100	chr8	133284329	133288259	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.0632	0.5196	NA	NA	NA	1.0	2.1	2.0	0.0	2.0	1.9
J101	chr8	133284329	133296497	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.818	0.2718	NA	NA	NA	0.0	0.0	3.0	0.0	0.0	0.0
J102	chr8	133284329	133296736	FALSE	LOW_COUNTS_INDEP_FILTER	2.1	0.106	0.9089	NA	NA	NA	3.9	0.0	2.0	4.0	2.0	1.0
J103	chr8	133284329	133297003	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.532	0.7813	NA	NA	NA	0.0	0.0	3.0	0.0	1.0	3.9
J104	chr8	133284329	133297133	TRUE	OK	703.3	0.0054	0.08103	0.6783	0.227	0.114	605.4	500.5	625.5	887.6	741.3	859.5
J105	chr8	133284329	133297742	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.629	0.2914	NA	NA	NA	0.0	0.0	2.0	0.0	0.0	0.0
J106	chr8	133284329	133298377	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J107	chr8	133284329	133301987	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J108	chr8	133284896	133296503	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.565	0.672	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.0
J109	chr8	133288431	133297133	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.173	0.7328	NA	NA	NA	0.0	0.0	1.0	1.0	1.0	0.0
N110	chr8	133254595	133256725	TRUE	OK	12.9	0.0101	0.9566	0.9898	0.021	0.010	15.8	10.4	8.1	16.9	12.7	13.5

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000104419.14
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE