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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr22 | 21919424 | 21919426 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.302 | 0.8632 | NA | NA | NA | 1.0 | 6.3 | 0.0 | 3.0 | 1.0 | 1.0 |
E002 | chr22 | 21919426 | 21923124 | TRUE | OK | 1912.2 | 0.00456 | 0.1156 | 0.7127 | -0.189 | -0.094 | 2099.2 | 2429.5 | 2291.4 | 1543.8 | 1521.8 | 1587.5 |
E003 | chr22 | 21923124 | 21923471 | TRUE | OK | 337.0 | 0.00252 | 0.6138 | 0.8925 | -0.054 | -0.027 | 399.3 | 371.2 | 424.0 | 274.0 | 281.1 | 272.6 |
E004 | chr22 | 21924875 | 21925028 | TRUE | OK | 16.0 | 0.0693 | 0.7276 | 0.9287 | -0.187 | -0.093 | 10.8 | 30.2 | 18.1 | 6.9 | 9.8 | 20.3 |
E005 | chr22 | 21925028 | 21925568 | TRUE | OK | 53.2 | 0.0156 | 0.7474 | 0.9345 | 0.109 | 0.054 | 55.2 | 62.6 | 62.4 | 33.8 | 40.2 | 64.8 |
E006 | chr22 | 21925568 | 21925662 | TRUE | OK | 251.3 | 0.00483 | 0.545 | 0.8703 | -0.086 | -0.043 | 285.9 | 268.0 | 344.5 | 212.5 | 181.2 | 215.6 |
E007 | chr22 | 21925959 | 21926062 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.2 | 0.0424 | 0.387 | NA | NA | NA | 7.9 | 19.8 | 9.1 | 5.0 | 7.8 | 5.8 |
E008 | chr22 | 21931147 | 21931248 | TRUE | OK | 240.4 | 0.00544 | 0.9244 | 0.9823 | 0.010 | 0.005 | 279.0 | 238.8 | 320.3 | 197.6 | 200.8 | 205.9 |
E009 | chr22 | 21931248 | 21931265 | TRUE | OK | 163.0 | 0.00771 | 0.4754 | 0.848 | 0.119 | 0.059 | 191.3 | 149.1 | 210.5 | 135.0 | 144.9 | 147.0 |
E010 | chr22 | 21931265 | 21931291 | TRUE | OK | 171.9 | 0.00909 | 0.5099 | 0.8592 | 0.114 | 0.057 | 203.1 | 154.3 | 224.6 | 142.0 | 148.9 | 158.6 |
E011 | chr22 | 21932713 | 21932775 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.268 | 0.6883 | NA | NA | NA | 3.0 | 0.0 | 5.0 | 1.0 | 2.9 | 0.0 |
E012 | chr22 | 21933390 | 21933579 | TRUE | OK | 304.8 | 0.00579 | 0.6272 | 0.8968 | 0.070 | 0.035 | 377.6 | 307.6 | 360.6 | 266.1 | 257.6 | 259.1 |
E013 | chr22 | 21934023 | 21934226 | TRUE | OK | 338.9 | 0.00684 | 0.3745 | 0.8148 | 0.136 | 0.068 | 395.4 | 330.5 | 417.0 | 322.7 | 268.3 | 299.7 |
E014 | chr22 | 21934226 | 21936929 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.8 | 0.0993 | 0.2323 | NA | NA | NA | 4.9 | 11.5 | 2.0 | 8.9 | 9.8 | 3.9 |
E015 | chr22 | 21936961 | 21937216 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.108 | 0.1648 | NA | NA | NA | 0.0 | 1.0 | 1.0 | 2.0 | 2.0 | 1.0 |
E016 | chr22 | 21937672 | 21938203 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.6 | 0.103 | 0.417 | NA | NA | NA | 4.9 | 1.0 | 4.0 | 1.0 | 3.9 | 6.8 |
E017 | chr22 | 21938203 | 21938531 | TRUE | OK | 18.9 | 0.0105 | 6.438e-07 | 0.0005866 | 1.638 | 0.819 | 8.9 | 9.4 | 17.1 | 25.8 | 22.5 | 30.0 |
E018 | chr22 | 21938531 | 21938576 | TRUE | OK | 13.0 | 0.023 | 0.0001286 | 0.03681 | 1.638 | 0.819 | 6.9 | 6.3 | 11.1 | 15.9 | 12.7 | 25.1 |
E019 | chr22 | 21938576 | 21938584 | TRUE | OK | 12.2 | 0.0545 | 0.005679 | 0.3122 | 1.495 | 0.748 | 3.9 | 10.4 | 10.1 | 14.9 | 8.8 | 25.1 |
E020 | chr22 | 21939531 | 21939680 | TRUE | OK | 307.6 | 0.00237 | 0.3149 | 0.7961 | 0.110 | 0.055 | 339.2 | 331.6 | 373.7 | 282.9 | 241.9 | 276.5 |
E021 | chr22 | 21940574 | 21940657 | TRUE | OK | 9.8 | 0.0148 | 0.3651 | 0.8121 | 0.387 | 0.193 | 7.9 | 12.5 | 10.1 | 9.9 | 8.8 | 9.7 |
E022 | chr22 | 21945842 | 21946108 | TRUE | OK | 296.7 | 0.00463 | 0.07864 | 0.6754 | 0.235 | 0.117 | 315.5 | 286.7 | 370.7 | 276.0 | 246.8 | 284.2 |
E023 | chr22 | 21952019 | 21952148 | TRUE | OK | 12.0 | 0.115 | 0.5846 | 0.8829 | 0.264 | 0.132 | 3.0 | 19.8 | 16.1 | 6.0 | 14.7 | 12.6 |
E024 | chr22 | 21952791 | 21952821 | TRUE | OK | 129.6 | 0.01 | 0.4789 | 0.8491 | 0.143 | 0.072 | 152.8 | 121.0 | 161.2 | 126.1 | 92.1 | 124.7 |
E025 | chr22 | 21952821 | 21952831 | TRUE | OK | 80.7 | 0.0129 | 0.2683 | 0.7817 | 0.249 | 0.125 | 96.6 | 64.6 | 100.7 | 81.4 | 64.6 | 76.4 |
E026 | chr22 | 21952831 | 21952848 | TRUE | OK | 40.8 | 0.011 | 0.3671 | 0.8126 | 0.228 | 0.114 | 44.4 | 33.4 | 55.4 | 33.8 | 33.3 | 44.5 |
J027 | chr22 | 21923471 | 21925568 | TRUE | OK | 143.0 | 0.00541 | 0.5356 | 0.8673 | -0.103 | -0.051 | 149.9 | 160.6 | 203.5 | 131.0 | 103.8 | 109.3 |
J028 | chr22 | 21925028 | 21925568 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.2 | 0.024 | 0.1577 | NA | NA | NA | 5.9 | 9.4 | 7.1 | 2.0 | 1.0 | 5.8 |
J029 | chr22 | 21925662 | 21925959 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J030 | chr22 | 21925662 | 21931147 | TRUE | OK | 150.4 | 0.00314 | 0.9423 | 0.9864 | -0.012 | -0.006 | 164.7 | 157.5 | 205.5 | 126.1 | 116.5 | 132.5 |
J031 | chr22 | 21931291 | 21933390 | TRUE | OK | 152.7 | 0.00612 | 0.7213 | 0.9265 | 0.055 | 0.027 | 183.4 | 144.9 | 197.4 | 124.1 | 133.2 | 133.4 |
J032 | chr22 | 21932775 | 21933390 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J033 | chr22 | 21933579 | 21934023 | TRUE | OK | 150.7 | 0.00697 | 0.5202 | 0.8624 | 0.111 | 0.055 | 190.3 | 149.1 | 171.2 | 142.0 | 116.5 | 135.4 |
J034 | chr22 | 21934226 | 21937672 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.261 | 0.1658 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 |
J035 | chr22 | 21934226 | 21938203 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.108 | 0.74 | NA | NA | NA | 2.0 | 0.0 | 1.0 | 2.0 | 0.0 | 1.0 |
J036 | chr22 | 21934226 | 21939531 | TRUE | OK | 194.4 | 0.00385 | 0.6222 | 0.8952 | 0.068 | 0.034 | 214.9 | 203.3 | 248.8 | 180.7 | 143.0 | 176.0 |
J037 | chr22 | 21937216 | 21938203 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.56 | 0.4449 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
J038 | chr22 | 21939680 | 21940574 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J039 | chr22 | 21939680 | 21945842 | TRUE | OK | 135.4 | 0.00197 | 0.279 | 0.7847 | 0.140 | 0.070 | 153.8 | 141.8 | 159.1 | 125.1 | 108.7 | 123.8 |
J040 | chr22 | 21946108 | 21952791 | TRUE | OK | 127.3 | 0.0102 | 0.4565 | 0.8416 | 0.153 | 0.077 | 148.9 | 118.9 | 158.1 | 125.1 | 89.1 | 123.8 |
J041 | chr22 | 21952148 | 21952791 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.539 | 0.6961 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000100034.14 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |