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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr1 | 45343882 | 45343883 | TRUE | OK | 28.9 | 0.0334 | 2.229e-06 | 0.001625 | -1.807 | -0.903 | 36.5 | 44.8 | 26.2 | 31.8 | 13.7 | 20.3 |
E002 | chr1 | 45343883 | 45345558 | TRUE | OK | 323.3 | 0.00655 | 0.03979 | 0.593 | -0.358 | -0.178 | 237.6 | 253.4 | 200.4 | 398.1 | 391.7 | 458.3 |
E003 | chr1 | 45345876 | 45345994 | TRUE | OK | 58.0 | 0.00931 | 0.1374 | 0.7279 | 0.360 | 0.180 | 39.4 | 24.0 | 36.3 | 68.5 | 84.2 | 95.7 |
E004 | chr1 | 45346692 | 45346779 | TRUE | OK | 48.8 | 0.017 | 0.1417 | 0.731 | 0.416 | 0.208 | 37.5 | 19.8 | 24.2 | 61.6 | 82.3 | 67.7 |
E005 | chr1 | 45346978 | 45347062 | TRUE | OK | 57.7 | 0.0209 | 0.09026 | 0.6892 | 0.488 | 0.244 | 45.4 | 21.9 | 26.2 | 74.5 | 96.0 | 82.2 |
E006 | chr1 | 45347608 | 45347693 | TRUE | OK | 58.5 | 0.00516 | 0.02905 | 0.5478 | 0.469 | 0.234 | 38.5 | 28.2 | 29.2 | 75.5 | 90.1 | 89.9 |
E007 | chr1 | 45347917 | 45348000 | TRUE | OK | 55.2 | 0.00499 | 0.02721 | 0.5388 | 0.482 | 0.241 | 38.5 | 24.0 | 27.2 | 76.4 | 73.4 | 91.8 |
E008 | chr1 | 45355302 | 45355449 | TRUE | OK | 51.5 | 0.00871 | 0.03116 | 0.5575 | 0.527 | 0.264 | 36.5 | 29.2 | 16.1 | 65.5 | 70.5 | 90.9 |
E009 | chr1 | 45385911 | 45385960 | TRUE | OK | 41.1 | 0.00931 | 0.09018 | 0.6892 | 0.445 | 0.223 | 32.5 | 17.7 | 17.1 | 56.6 | 50.9 | 71.5 |
E010 | chr1 | 45398732 | 45398980 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.0794 | 0.4932 | NA | NA | NA | 0.0 | 3.1 | 1.0 | 2.0 | 3.9 | 6.8 |
E011 | chr1 | 45421724 | 45421846 | TRUE | OK | 67.8 | 0.0135 | 0.5445 | 0.8701 | 0.150 | 0.075 | 53.2 | 29.2 | 45.3 | 96.3 | 77.4 | 105.4 |
E012 | chr1 | 45457563 | 45457621 | TRUE | OK | 52.7 | 0.022 | 0.3382 | 0.8035 | 0.281 | 0.140 | 37.5 | 18.8 | 37.3 | 82.4 | 69.5 | 70.6 |
E013 | chr1 | 45457621 | 45457799 | TRUE | OK | 72.3 | 0.0201 | 0.7284 | 0.929 | 0.088 | 0.044 | 51.3 | 32.3 | 56.4 | 107.2 | 94.0 | 92.8 |
E014 | chr1 | 45457799 | 45457871 | TRUE | OK | 36.2 | 0.0139 | 0.8856 | 0.9725 | 0.037 | 0.018 | 28.6 | 15.6 | 27.2 | 55.6 | 43.1 | 47.4 |
E015 | chr1 | 45490851 | 45491161 | TRUE | OK | 45.2 | 0.0169 | 0.4029 | 0.8249 | 0.245 | 0.122 | 31.6 | 16.7 | 33.2 | 64.5 | 51.9 | 73.5 |
E016 | chr1 | 45491161 | 45491163 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.865 | 1 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 |
J017 | chr1 | 45345558 | 45345876 | TRUE | OK | 37.6 | 0.0205 | 0.2165 | 0.7636 | 0.420 | 0.210 | 23.7 | 14.6 | 24.2 | 37.7 | 55.8 | 69.6 |
J018 | chr1 | 45345994 | 45346692 | TRUE | OK | 27.8 | 0.00695 | 0.2072 | 0.7603 | 0.357 | 0.179 | 22.7 | 8.3 | 16.1 | 37.7 | 38.2 | 43.5 |
J019 | chr1 | 45345994 | 45346978 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.1 | 0.212 | 0.3252 | NA | NA | NA | 1.0 | 1.0 | 0.0 | 0.0 | 5.9 | 4.8 |
J020 | chr1 | 45346779 | 45346978 | TRUE | OK | 31.3 | 0.0266 | 0.2413 | 0.7728 | 0.395 | 0.197 | 26.6 | 15.6 | 10.1 | 41.7 | 53.9 | 39.6 |
J021 | chr1 | 45347062 | 45347608 | TRUE | OK | 43.5 | 0.00756 | 0.03278 | 0.5647 | 0.538 | 0.269 | 27.6 | 16.7 | 24.2 | 54.6 | 71.5 | 66.7 |
J022 | chr1 | 45347693 | 45347917 | TRUE | OK | 38.5 | 0.00382 | 0.01899 | 0.4834 | 0.569 | 0.285 | 22.7 | 15.6 | 21.2 | 55.6 | 52.9 | 62.8 |
J023 | chr1 | 45348000 | 45355302 | TRUE | OK | 25.8 | 0.00586 | 0.09762 | 0.6965 | 0.484 | 0.242 | 17.7 | 14.6 | 9.1 | 31.8 | 36.2 | 45.4 |
J024 | chr1 | 45355449 | 45385911 | TRUE | OK | 30.9 | 0.00928 | 0.1227 | 0.7182 | 0.451 | 0.226 | 22.7 | 15.6 | 12.1 | 35.7 | 41.1 | 58.0 |
J025 | chr1 | 45355449 | 45421724 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.368 | 0.9538 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 2.0 | 0.0 | 0.0 |
J026 | chr1 | 45385960 | 45421724 | TRUE | OK | 34.0 | 0.00685 | 0.115 | 0.7122 | 0.419 | 0.210 | 27.6 | 14.6 | 14.1 | 46.7 | 42.1 | 59.0 |
J027 | chr1 | 45398980 | 45421724 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.207 | 0.3147 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.9 |
J028 | chr1 | 45421846 | 45457563 | TRUE | OK | 43.0 | 0.0363 | 0.7158 | 0.9247 | 0.103 | 0.051 | 34.5 | 13.6 | 34.2 | 64.5 | 50.9 | 59.9 |
J029 | chr1 | 45457871 | 45490851 | TRUE | OK | 21.2 | 0.112 | 0.4583 | 0.8423 | 0.356 | 0.178 | 16.8 | 2.1 | 17.1 | 36.7 | 22.5 | 31.9 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000070759.17 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |