Raw Counts Table (ENSG00000059145.18)
binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Raw Counts |
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 |
E001 | chr16 | 1363204 | 1363205 | TRUE | OK | 207.4 | 0.0124 | 0.8803 | 0.9712 | -0.025 | -0.012 | 189.0 | 253.0 | 191.0 | 208.0 | 154.0 | 253.0 |
E002 | chr16 | 1363205 | 1364173 | TRUE | OK | 1125.8 | 0.0151 | 0.1487 | 0.7342 | -0.330 | -0.165 | 1079.0 | 1548.0 | 1046.0 | 1009.0 | 932.0 | 1147.0 |
E003 | chr16 | 1364173 | 1364255 | TRUE | OK | 304.0 | 0.00184 | 0.07834 | 0.6752 | -0.175 | -0.088 | 335.0 | 348.0 | 290.0 | 265.0 | 268.0 | 324.0 |
E004 | chr16 | 1364255 | 1364998 | TRUE | OK | 835.0 | 0.00249 | 0.02472 | 0.5236 | -0.216 | -0.108 | 897.0 | 987.0 | 793.0 | 742.0 | 729.0 | 876.0 |
E005 | chr16 | 1364998 | 1365011 | TRUE | OK | 162.5 | 0.0141 | 0.6533 | 0.9055 | -0.100 | -0.050 | 164.0 | 207.0 | 137.0 | 167.0 | 117.0 | 185.0 |
E006 | chr16 | 1365011 | 1366017 | TRUE | OK | 809.8 | 0.00387 | 0.1922 | 0.7545 | -0.141 | -0.070 | 864.0 | 851.0 | 836.0 | 746.0 | 684.0 | 897.0 |
E007 | chr16 | 1366017 | 1366148 | TRUE | OK | 287.1 | 0.00496 | 0.4534 | 0.8405 | -0.096 | -0.048 | 328.0 | 279.0 | 292.0 | 258.0 | 249.0 | 325.0 |
E008 | chr16 | 1366148 | 1366277 | TRUE | OK | 323.3 | 0.00831 | 0.4888 | 0.8524 | -0.113 | -0.056 | 391.0 | 295.0 | 332.0 | 278.0 | 302.0 | 352.0 |
E009 | chr16 | 1366277 | 1366395 | TRUE | OK | 353.3 | 0.0118 | 0.5606 | 0.875 | -0.112 | -0.056 | 430.0 | 305.0 | 378.0 | 305.0 | 333.0 | 381.0 |
E010 | chr16 | 1367091 | 1367241 | TRUE | OK | 342.4 | 0.00665 | 0.6356 | 0.8997 | -0.063 | -0.031 | 376.0 | 320.0 | 365.0 | 278.0 | 346.0 | 380.0 |
E011 | chr16 | 1367241 | 1367291 | TRUE | OK | 349.5 | 0.0108 | 0.7659 | 0.94 | 0.054 | 0.027 | 385.0 | 287.0 | 374.0 | 328.0 | 349.0 | 387.0 |
E012 | chr16 | 1367291 | 1367349 | TRUE | OK | 348.2 | 0.0096 | 0.9777 | 0.9946 | -0.005 | -0.002 | 380.0 | 297.0 | 384.0 | 323.0 | 340.0 | 377.0 |
E013 | chr16 | 1367655 | 1367712 | TRUE | OK | 285.3 | 0.00803 | 0.9505 | 0.9885 | 0.015 | 0.007 | 315.0 | 247.0 | 302.0 | 250.0 | 288.0 | 320.0 |
E014 | chr16 | 1367712 | 1367858 | TRUE | OK | 232.4 | 0.00257 | 0.7253 | 0.9278 | 0.044 | 0.022 | 235.0 | 224.0 | 237.0 | 215.0 | 243.0 | 247.0 |
E015 | chr16 | 1367858 | 1368203 | TRUE | OK | 54.3 | 0.0045 | 0.102 | 0.6995 | 0.327 | 0.163 | 50.0 | 51.0 | 46.0 | 47.0 | 62.0 | 72.0 |
E016 | chr16 | 1369933 | 1370129 | TRUE | OK | 28.7 | 0.0148 | 0.08485 | 0.6834 | 0.530 | 0.265 | 29.0 | 18.0 | 25.0 | 24.0 | 40.0 | 38.0 |
E017 | chr16 | 1370129 | 1370232 | TRUE | OK | 209.5 | 0.00332 | 0.4409 | 0.8365 | -0.094 | -0.047 | 237.0 | 207.0 | 212.0 | 179.0 | 210.0 | 218.0 |
E018 | chr16 | 1370232 | 1370357 | TRUE | OK | 222.7 | 0.00434 | 0.2462 | 0.7744 | -0.154 | -0.077 | 250.0 | 222.0 | 238.0 | 184.0 | 227.0 | 221.0 |
E019 | chr16 | 1371518 | 1371611 | TRUE | OK | 197.2 | 0.00468 | 0.2962 | 0.7907 | -0.145 | -0.073 | 227.0 | 199.0 | 201.0 | 161.0 | 205.0 | 195.0 |
E020 | chr16 | 1378913 | 1379121 | TRUE | OK | 42.4 | 0.0252 | 0.02577 | 0.53 | -0.735 | -0.367 | 54.0 | 37.0 | 69.0 | 26.0 | 36.0 | 33.0 |
E021 | chr16 | 1379121 | 1379176 | TRUE | OK | 23.1 | 0.0301 | 0.1062 | 0.7039 | -0.631 | -0.316 | 34.0 | 17.0 | 34.0 | 20.0 | 15.0 | 19.0 |
E022 | chr16 | 1379532 | 1379593 | TRUE | OK | 81.6 | 0.00903 | 0.01508 | 0.449 | -0.503 | -0.251 | 106.0 | 85.0 | 98.0 | 73.0 | 68.0 | 61.0 |
E023 | chr16 | 1379593 | 1379645 | TRUE | OK | 61.2 | 0.0168 | 0.241 | 0.7727 | -0.316 | -0.158 | 83.0 | 52.0 | 71.0 | 57.0 | 56.0 | 50.0 |
E024 | chr16 | 1379645 | 1379680 | TRUE | OK | 16.6 | 0.0127 | 0.2615 | 0.7793 | -0.386 | -0.193 | 16.0 | 18.0 | 23.0 | 17.0 | 10.0 | 16.0 |
E025 | chr16 | 1379680 | 1379683 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.4 | 0.215 | 0.2452 | NA | NA | NA | 7.0 | 0.0 | 2.0 | 10.0 | 4.0 | 4.0 |
E026 | chr16 | 1385207 | 1385385 | TRUE | OK | 55.1 | 0.0698 | 0.0001042 | 0.03201 | 1.826 | 0.913 | 27.0 | 10.0 | 39.0 | 65.0 | 106.0 | 89.0 |
E027 | chr16 | 1390631 | 1390694 | TRUE | OK | 57.1 | 0.0206 | 2.116e-11 | 7.167e-08 | 2.041 | 1.020 | 27.0 | 15.0 | 28.0 | 77.0 | 112.0 | 89.0 |
E028 | chr16 | 1392890 | 1392976 | TRUE | OK | 62.8 | 0.0244 | 2.562e-10 | 6.581e-07 | 2.021 | 1.010 | 34.0 | 19.0 | 25.0 | 76.0 | 129.0 | 100.0 |
E029 | chr16 | 1394130 | 1394215 | TRUE | OK | 53.5 | 0.0286 | 3.888e-11 | 1.2e-07 | 2.350 | 1.175 | 21.0 | 19.0 | 15.0 | 65.0 | 126.0 | 80.0 |
E030 | chr16 | 1397044 | 1397177 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.142 | 0.01528 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 2.0 | 1.0 | 3.0 |
E031 | chr16 | 1397177 | 1397295 | TRUE | OK | 51.0 | 0.017 | 6.994e-17 | 5.947e-13 | 2.541 | 1.270 | 21.0 | 13.0 | 13.0 | 68.0 | 108.0 | 88.0 |
E032 | chr16 | 1398304 | 1398941 | TRUE | OK | 53.9 | 0.00921 | 2.307e-05 | 0.01061 | 0.968 | 0.484 | 30.0 | 49.0 | 33.0 | 72.0 | 76.0 | 66.0 |
E033 | chr16 | 1399139 | 1399373 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.9 | 0.0613 | 0.3391 | NA | NA | NA | 12.0 | 5.0 | 5.0 | 5.0 | 15.0 | 12.0 |
E034 | chr16 | 1399373 | 1399508 | TRUE | OK | 100.1 | 0.0117 | 1.022e-16 | 8.148e-13 | 1.896 | 0.948 | 56.0 | 34.0 | 44.0 | 135.0 | 144.0 | 197.0 |
E035 | chr16 | 1399508 | 1399509 | TRUE | OK | 68.9 | 0.0138 | 7.369e-13 | 3.317e-09 | 1.847 | 0.924 | 37.0 | 22.0 | 35.0 | 98.0 | 91.0 | 137.0 |
E036 | chr16 | 1401336 | 1401476 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.302 | 0.2223 | NA | NA | NA | 2.0 | 0.0 | 0.0 | 5.0 | 1.0 | 1.0 |
E037 | chr16 | 1401567 | 1401701 | TRUE | OK | 91.8 | 0.00373 | 1.352e-24 | 3.234e-20 | 1.751 | 0.875 | 44.0 | 41.0 | 47.0 | 141.0 | 127.0 | 158.0 |
E038 | chr16 | 1403167 | 1403190 | TRUE | OK | 62.6 | 0.00728 | 2.555e-17 | 2.328e-13 | 1.873 | 0.936 | 33.0 | 25.0 | 26.0 | 107.0 | 85.0 | 105.0 |
E039 | chr16 | 1403190 | 1403207 | TRUE | OK | 58.4 | 0.0103 | 6.156e-14 | 3.184e-10 | 1.830 | 0.915 | 31.0 | 25.0 | 24.0 | 104.0 | 85.0 | 86.0 |
E040 | chr16 | 1403207 | 1403236 | TRUE | OK | 65.3 | 0.00611 | 1.397e-16 | 1.069e-12 | 1.719 | 0.859 | 39.0 | 28.0 | 28.0 | 106.0 | 93.0 | 103.0 |
E041 | chr16 | 1403236 | 1403344 | TRUE | OK | 90.6 | 0.0274 | 7.967e-10 | 1.785e-06 | 1.901 | 0.950 | 61.0 | 29.0 | 31.0 | 143.0 | 147.0 | 141.0 |
E042 | chr16 | 1407266 | 1407341 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E043 | chr16 | 1413845 | 1414009 | TRUE | OK | 83.8 | 0.0382 | 3.131e-08 | 4.437e-05 | 1.965 | 0.983 | 58.0 | 27.0 | 23.0 | 113.0 | 151.0 | 139.0 |
E044 | chr16 | 1414009 | 1414055 | TRUE | OK | 48.0 | 0.0445 | 7.115e-07 | 0.0006357 | 1.977 | 0.988 | 35.0 | 14.0 | 12.0 | 64.0 | 86.0 | 82.0 |
E045 | chr16 | 1414055 | 1414078 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.156 | 0.9734 | NA | NA | NA | 1.0 | 2.0 | 0.0 | 2.0 | 1.0 | 0.0 |
E046 | chr16 | 1414614 | 1414691 | TRUE | OK | 47.7 | 0.0482 | 1.168e-06 | 0.0009509 | 1.994 | 0.997 | 35.0 | 14.0 | 11.0 | 64.0 | 85.0 | 82.0 |
E047 | chr16 | 1414691 | 1414695 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.9 | 0.023 | 0.005111 | NA | NA | NA | 4.0 | 5.0 | 2.0 | 8.0 | 13.0 | 10.0 |
E048 | chr16 | 1414695 | 1414697 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.0311 | 0.0274 | NA | NA | NA | 2.0 | 4.0 | 2.0 | 6.0 | 9.0 | 6.0 |
E049 | chr16 | 1414697 | 1414720 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.0612 | 0.01108 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 4.0 | 5.0 | 3.0 |
E050 | chr16 | 1414720 | 1414751 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.1 | 0.108 | 0.2958 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 1.0 | 2.0 | 2.0 |
J051 | chr16 | 1364255 | 1366017 | TRUE | OK | 14.8 | 0.0414 | 0.9654 | 0.9919 | 0.053 | 0.027 | 11.0 | 16.0 | 17.0 | 9.0 | 24.0 | 12.0 |
J052 | chr16 | 1366395 | 1367091 | TRUE | OK | 146.0 | 0.00607 | 0.2221 | 0.7656 | -0.195 | -0.097 | 178.0 | 150.0 | 144.0 | 111.0 | 152.0 | 145.0 |
J053 | chr16 | 1366395 | 1367241 | TRUE | OK | 74.7 | 0.0249 | 0.7612 | 0.9388 | -0.096 | -0.048 | 95.0 | 55.0 | 85.0 | 80.0 | 58.0 | 78.0 |
J054 | chr16 | 1367349 | 1367655 | TRUE | OK | 241.2 | 0.0148 | 0.6154 | 0.893 | 0.105 | 0.053 | 272.0 | 183.0 | 255.0 | 221.0 | 250.0 | 276.0 |
J055 | chr16 | 1367858 | 1369933 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J056 | chr16 | 1367858 | 1370129 | TRUE | OK | 88.3 | 0.00278 | 0.9464 | 0.9873 | 0.012 | 0.006 | 91.0 | 86.0 | 90.0 | 83.0 | 96.0 | 86.0 |
J057 | chr16 | 1370357 | 1371518 | TRUE | OK | 136.0 | 0.00215 | 0.1766 | 0.7471 | -0.171 | -0.085 | 149.0 | 142.0 | 145.0 | 111.0 | 138.0 | 134.0 |
J058 | chr16 | 1370357 | 1378913 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.538 | 0.5668 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J059 | chr16 | 1371611 | 1378913 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.5 | 0.115 | 0.1365 | NA | NA | NA | 3.0 | 7.0 | 9.0 | 3.0 | 5.0 | 0.0 |
J060 | chr16 | 1371611 | 1379532 | TRUE | OK | 58.5 | 0.00973 | 0.09462 | 0.6934 | -0.377 | -0.189 | 72.0 | 61.0 | 67.0 | 59.0 | 50.0 | 43.0 |
J061 | chr16 | 1371611 | 1379593 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.6 | 0.0669 | 0.6723 | NA | NA | NA | 11.0 | 3.0 | 10.0 | 12.0 | 5.0 | 11.0 |
J062 | chr16 | 1371611 | 1385207 | TRUE | OK | 12.8 | 0.149 | 0.09814 | 0.6967 | 1.284 | 0.642 | 6.0 | 3.0 | 14.0 | 6.0 | 24.0 | 25.0 |
J063 | chr16 | 1385385 | 1390631 | TRUE | OK | 41.3 | 0.0557 | 3.156e-06 | 0.002188 | 2.099 | 1.049 | 21.0 | 6.0 | 22.0 | 57.0 | 81.0 | 65.0 |
J064 | chr16 | 1390694 | 1392890 | TRUE | OK | 40.5 | 0.0195 | 2.038e-09 | 4.082e-06 | 1.914 | 0.957 | 21.0 | 12.0 | 20.0 | 48.0 | 80.0 | 66.0 |
J065 | chr16 | 1392976 | 1394130 | TRUE | OK | 40.9 | 0.0292 | 7.084e-09 | 1.189e-05 | 2.145 | 1.073 | 18.0 | 16.0 | 13.0 | 46.0 | 94.0 | 62.0 |
J066 | chr16 | 1394215 | 1397177 | TRUE | OK | 36.9 | 0.038 | 2.269e-09 | 4.499e-06 | 2.484 | 1.242 | 17.0 | 11.0 | 7.0 | 49.0 | 87.0 | 54.0 |
J067 | chr16 | 1397295 | 1399373 | TRUE | OK | 24.7 | 0.00962 | 5.959e-16 | 4e-12 | 2.748 | 1.374 | 9.0 | 5.0 | 6.0 | 31.0 | 48.0 | 52.0 |
J068 | chr16 | 1398941 | 1399373 | TRUE | OK | 19.3 | 0.00716 | 0.0001286 | 0.03681 | 1.198 | 0.599 | 11.0 | 18.0 | 7.0 | 25.0 | 26.0 | 30.0 |
J069 | chr16 | 1399509 | 1401567 | TRUE | OK | 62.5 | 0.0133 | 3.657e-13 | 1.686e-09 | 1.895 | 0.947 | 29.0 | 20.0 | 34.0 | 92.0 | 81.0 | 125.0 |
J070 | chr16 | 1401476 | 1401567 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J071 | chr16 | 1401701 | 1403167 | TRUE | OK | 52.5 | 0.00868 | 7.309e-14 | 3.729e-10 | 1.798 | 0.899 | 23.0 | 24.0 | 26.0 | 94.0 | 71.0 | 81.0 |
J072 | chr16 | 1403344 | 1407266 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J073 | chr16 | 1403344 | 1413845 | TRUE | OK | 52.8 | 0.0248 | 8.703e-10 | 1.914e-06 | 1.978 | 0.989 | 35.0 | 16.0 | 16.0 | 78.0 | 91.0 | 86.0 |
J074 | chr16 | 1414009 | 1414614 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.102 | 0.3729 | NA | NA | NA | 1.0 | 2.0 | 0.0 | 3.0 | 0.0 | 3.0 |
J075 | chr16 | 1414055 | 1414614 | TRUE | OK | 40.0 | 0.0714 | 1.079e-05 | 0.005881 | 2.152 | 1.076 | 28.0 | 12.0 | 6.0 | 50.0 | 78.0 | 70.0 |
N076 | chr16 | 1363215 | 1363412 | TRUE | OK | 14.5 | 0.0513 | 0.203 | 0.7589 | -0.694 | -0.347 | 8.0 | 19.0 | 27.0 | 11.0 | 11.0 | 11.0 |
N077 | chr16 | 1367349 | 1367664 | TRUE | OK | 18.1 | 0.00649 | 0.1143 | 0.7118 | -0.488 | -0.244 | 23.0 | 21.0 | 20.0 | 13.0 | 18.0 | 14.0 |
Color Codes |
NO TEST
|
p > 0.05
|
p < 0.05
|
p < 0.005
|
p < 5e-04
|
p < 5e-05
|