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Normalized Counts Table (ENSG00000021762.20)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr11	3087106	3087115	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.204	0.6163	NA	NA	NA	0.0	4.2	2.0	2.0	0.0	1.0
E002	chr11	3087115	3087120	FALSE	LOW_COUNTS_INDEP_FILTER	2.7	0.0907	0.6104	NA	NA	NA	3.0	5.2	2.0	4.0	0.0	1.9
E003	chr11	3087120	3087378	TRUE	OK	80.4	0.0147	0.7881	0.9465	-0.064	-0.032	79.9	114.7	81.6	65.5	57.8	83.1
E004	chr11	3087378	3087579	TRUE	OK	212.6	0.017	0.6786	0.9131	-0.097	-0.048	219.9	302.4	213.5	150.9	174.3	214.6
E005	chr11	3087579	3087783	TRUE	OK	351.1	0.0155	0.2796	0.7849	-0.251	-0.126	341.2	527.6	394.8	282.0	253.6	307.5
E006	chr11	3087783	3087905	TRUE	OK	301.2	0.0116	0.06069	0.649	-0.368	-0.184	323.4	446.3	347.5	249.2	203.7	236.9
E007	chr11	3087905	3087915	TRUE	OK	139.6	0.0154	0.08364	0.6817	-0.405	-0.203	156.8	213.8	154.1	118.1	106.7	88.0
E008	chr11	3087915	3088000	TRUE	OK	233.3	0.0128	0.276	0.7835	-0.227	-0.114	240.6	331.6	263.9	208.5	193.9	161.5
E009	chr11	3088000	3088177	TRUE	OK	325.9	0.00281	0.09879	0.6969	-0.183	-0.092	366.8	394.1	391.8	280.0	275.2	247.5
E010	chr11	3088177	3088343	TRUE	OK	341.0	0.00144	0.5633	0.876	-0.052	-0.026	379.6	385.8	398.9	297.8	284.0	299.7
E011	chr11	3089845	3089948	TRUE	OK	324.6	0.00337	0.3777	0.816	0.106	0.053	336.2	376.4	347.5	282.9	311.4	293.0
E012	chr11	3090557	3090696	TRUE	OK	360.6	0.00389	0.7578	0.9377	-0.039	-0.019	365.8	445.2	416.0	314.7	320.2	301.7
E013	chr11	3090696	3090722	FALSE	LOW_COUNTS_INDEP_FILTER	4.0	0.051	0.03793	NA	NA	NA	7.9	3.1	8.1	3.0	2.0	0.0
E014	chr11	3092431	3092558	TRUE	OK	352.7	0.00228	0.9787	0.9948	-0.001	-0.001	365.8	414.0	407.9	311.7	285.9	330.7
E015	chr11	3092866	3093052	TRUE	OK	508.0	0.00154	0.3467	0.8062	0.083	0.041	530.5	553.7	588.2	459.7	424.0	492.1
E016	chr11	3093384	3093526	TRUE	OK	38.6	0.0329	0.5942	0.8861	-0.204	-0.102	59.2	29.2	49.4	20.8	37.2	35.8
E017	chr11	3093526	3093663	TRUE	OK	541.7	0.00176	0.298	0.7911	0.093	0.046	604.4	546.4	627.5	491.4	469.1	511.5
E018	chr11	3093745	3093835	TRUE	OK	425.3	0.00262	0.7098	0.9229	0.039	0.019	491.0	423.3	501.6	371.3	361.4	403.2
E019	chr11	3094236	3094334	TRUE	OK	317.4	0.0105	0.2586	0.7784	0.199	0.099	394.4	271.1	342.5	311.7	275.2	309.4
E020	chr11	3094334	3094879	TRUE	OK	13.4	0.013	0.8779	0.9705	0.058	0.029	18.7	12.5	13.1	11.9	10.8	13.5
E021	chr11	3100157	3100256	TRUE	OK	284.9	0.00654	0.2941	0.7896	0.156	0.078	346.1	259.6	310.2	257.1	270.3	265.9
E022	chr11	3101602	3101699	TRUE	OK	303.0	0.00677	0.7158	0.9247	0.051	0.025	379.6	282.6	342.5	277.0	263.4	272.6
E023	chr11	3102182	3102266	TRUE	OK	310.9	0.00892	0.4639	0.844	0.118	0.059	387.5	273.2	350.5	294.9	265.4	293.9
E024	chr11	3102266	3102281	TRUE	OK	264.2	0.00933	0.6437	0.9022	0.071	0.035	320.5	225.2	325.3	255.1	225.2	234.0
E025	chr11	3103238	3103320	TRUE	OK	349.0	0.00936	0.95	0.9884	0.005	0.002	434.8	315.9	422.0	337.5	279.1	304.6
E026	chr11	3104192	3104251	TRUE	OK	343.0	0.00607	0.7905	0.9472	-0.045	-0.022	417.1	321.2	430.1	311.7	276.2	301.7
E027	chr11	3104251	3104377	TRUE	OK	456.3	0.00275	0.6424	0.9018	-0.048	-0.024	527.5	479.7	547.9	421.9	360.4	400.3
E028	chr11	3107262	3107455	TRUE	OK	581.7	0.00197	0.5988	0.8876	-0.048	-0.024	667.5	598.5	716.1	496.4	480.8	530.8
E029	chr11	3107770	3107789	TRUE	OK	281.4	0.00448	0.8816	0.9714	0.019	0.010	327.4	270.1	344.5	230.3	238.0	278.4
E030	chr11	3107789	3107945	TRUE	OK	444.0	0.0026	0.7246	0.9276	0.033	0.016	483.1	432.7	565.1	391.2	381.9	409.9
E031	chr11	3119546	3119631	TRUE	OK	399.3	0.00459	0.7895	0.9469	0.024	0.012	403.3	390.0	541.9	357.4	340.8	362.6
E032	chr11	3119631	3119987	TRUE	OK	41.0	0.00874	0.248	0.775	-0.291	-0.146	36.5	51.1	62.4	31.8	35.3	29.0
E033	chr11	3120420	3120543	TRUE	OK	359.6	0.00638	0.638	0.9004	-0.085	-0.043	374.7	349.3	514.7	310.7	300.6	307.5
E034	chr11	3120543	3120607	TRUE	OK	423.0	0.00742	0.4258	0.8316	-0.136	-0.068	474.3	403.5	598.3	341.5	330.0	390.6
E035	chr11	3120607	3120624	TRUE	OK	330.8	0.00468	0.3156	0.7962	-0.136	-0.068	383.6	329.5	442.2	277.0	247.8	304.6
E036	chr11	3121803	3121805	FALSE	LOW_COUNTS_INDEP_FILTER	6.5	0.0798	0.7067	NA	NA	NA	10.8	7.3	5.0	7.9	1.0	6.8
E037	chr11	3121805	3121996	TRUE	OK	13.5	0.0148	0.4186	0.8297	-0.307	-0.154	18.7	13.6	17.1	13.9	5.9	11.6
E038	chr11	3121996	3122025	TRUE	OK	374.3	0.00845	0.3683	0.8129	-0.157	-0.079	441.7	353.5	518.7	291.9	285.9	353.9
E039	chr11	3122025	3122066	TRUE	OK	430.6	0.00786	0.3947	0.8222	-0.140	-0.070	502.9	415.0	586.2	340.5	325.1	413.8
E040	chr11	3122066	3122098	TRUE	OK	454.7	0.00681	0.5264	0.8644	-0.102	-0.051	543.3	428.6	600.3	375.3	358.4	422.5
E041	chr11	3122098	3122347	TRUE	OK	28.1	0.00647	0.9513	0.9887	-0.018	-0.009	31.6	26.1	37.3	24.8	23.5	25.1
E042	chr11	3122347	3122353	TRUE	OK	370.8	0.00621	0.6682	0.9098	-0.068	-0.034	455.5	349.3	466.3	316.7	295.7	341.3
E043	chr11	3122353	3122378	TRUE	OK	381.4	0.0074	0.7242	0.9275	-0.060	-0.030	474.3	357.7	472.4	316.7	303.6	363.5
E044	chr11	3122378	3122428	TRUE	OK	401.1	0.00697	0.7632	0.9393	0.039	0.019	488.1	362.9	484.5	359.4	337.9	374.2
E045	chr11	3126472	3126482	TRUE	OK	318.5	0.00274	0.02574	0.5299	0.245	0.123	343.1	287.8	366.6	304.8	292.8	316.2
E046	chr11	3126482	3126555	TRUE	OK	336.1	0.00294	0.01911	0.4845	0.261	0.130	362.9	302.4	382.7	328.6	317.3	322.9
E047	chr11	3126555	3126594	TRUE	OK	118.1	0.0033	0.02784	0.5419	0.318	0.159	119.3	102.2	138.0	123.1	114.6	111.2
E048	chr11	3126594	3126608	TRUE	OK	89.1	0.00288	0.04535	0.6117	0.309	0.155	87.8	84.5	99.7	92.3	80.3	89.9
E049	chr11	3126608	3126644	TRUE	OK	56.9	0.00412	0.2481	0.775	0.218	0.109	59.2	53.2	66.5	56.6	56.8	49.3
E050	chr11	3129012	3129169	TRUE	OK	136.0	0.00551	2.583e-05	0.01147	0.670	0.335	126.2	95.9	144.0	149.9	156.7	143.1
E051	chr11	3129169	3129329	FALSE	LOW_COUNTS_INDEP_FILTER	4.3	0.0518	0.2744	NA	NA	NA	3.9	2.1	5.0	7.9	4.9	1.9
E052	chr11	3146179	3146661	TRUE	OK	10.3	0.0256	0.8067	0.9516	0.123	0.062	12.8	9.4	11.1	14.9	5.9	7.7
E053	chr11	3160917	3161393	FALSE	LOW_COUNTS_INDEP_FILTER	8.3	0.0411	0.4066	NA	NA	NA	12.8	7.3	4.0	9.9	8.8	6.8
E054	chr11	3163939	3164423	FALSE	LOW_COUNTS_INDEP_FILTER	5.4	0.038	0.3387	NA	NA	NA	6.9	2.1	6.0	7.9	2.9	6.8
E055	chr11	3165215	3165222	TRUE	OK	71.0	0.005	6.65e-05	0.02345	0.733	0.367	55.2	60.5	70.5	76.4	92.1	71.5
E056	chr11	3165222	3165273	TRUE	OK	70.5	0.00396	8.322e-06	0.00476	0.786	0.393	54.2	58.4	68.5	77.4	89.1	75.4
E057	chr11	3165273	3165300	TRUE	OK	48.2	0.00493	0.001762	0.1789	0.644	0.322	36.5	40.7	53.4	54.6	54.8	49.3
E058	chr11	3165300	3165310	TRUE	OK	18.3	0.0644	0.1139	0.7116	0.841	0.421	8.9	16.7	20.1	24.8	29.4	9.7
E059	chr11	3165310	3165336	FALSE	LOW_COUNTS_INDEP_FILTER	6.1	0.0433	0.1457	NA	NA	NA	2.0	6.3	7.1	6.0	10.8	4.8
E060	chr11	3165336	3165352	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.326	0.04327	NA	NA	NA	0.0	0.0	1.0	3.0	5.9	0.0
E061	chr11	3165510	3165770	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.39	0.2061	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	1.0
E062	chr11	3166624	3166739	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J063	chr11	3087783	3088177	FALSE	LOW_COUNTS_INDEP_FILTER	2.7	0.0892	0.07351	NA	NA	NA	5.9	1.0	6.0	2.0	1.0	0.0
J064	chr11	3088343	3089845	TRUE	OK	204.5	0.00561	0.988	0.9971	0.002	0.001	214.0	259.6	214.5	183.7	184.1	171.1
J065	chr11	3089948	3090557	TRUE	OK	214.4	0.00482	0.4478	0.8389	0.107	0.054	206.1	260.7	232.7	190.6	209.6	186.6
J066	chr11	3090696	3092431	TRUE	OK	209.5	0.00171	0.5282	0.8649	-0.068	-0.034	222.8	254.4	241.7	179.7	180.2	177.9
J067	chr11	3092558	3092866	TRUE	OK	206.1	0.00453	0.579	0.881	0.085	0.043	222.8	227.3	226.6	191.6	154.7	213.7
J068	chr11	3093052	3093526	TRUE	OK	294.6	0.00099	0.1292	0.7228	0.135	0.067	296.8	312.8	344.5	272.0	255.6	286.2
J069	chr11	3093663	3093745	TRUE	OK	328.1	0.00193	0.7615	0.9388	0.032	0.016	367.8	337.8	388.8	296.8	260.5	317.1
J070	chr11	3093835	3094236	TRUE	OK	235.5	0.0136	0.1915	0.7544	0.258	0.129	297.8	186.6	248.8	235.3	211.5	233.0
J071	chr11	3094334	3100157	TRUE	OK	175.3	0.00397	0.2809	0.7852	0.148	0.074	209.0	161.6	193.4	155.9	163.5	168.2
J072	chr11	3100256	3101602	TRUE	OK	187.3	0.00474	0.5728	0.8791	0.080	0.040	231.7	178.3	205.5	169.8	166.5	172.1
J073	chr11	3101699	3102182	TRUE	OK	197.6	0.00803	0.434	0.8341	0.128	0.064	249.5	174.1	216.6	184.7	175.3	185.6
J074	chr11	3102281	3103238	TRUE	OK	241.9	0.0108	0.678	0.913	0.064	0.032	298.8	200.2	300.2	230.3	208.6	213.7
J075	chr11	3103320	3104192	TRUE	OK	221.8	0.00795	0.8405	0.9609	-0.035	-0.017	276.1	209.6	267.9	212.5	163.5	201.1
J076	chr11	3104251	3122066	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.219	0.1597	NA	NA	NA	2.0	1.0	0.0	0.0	0.0	0.0
J077	chr11	3104377	3107262	TRUE	OK	265.1	0.00139	0.2923	0.7894	-0.102	-0.051	307.6	293.0	317.3	233.3	204.7	234.9
J078	chr11	3107455	3107770	TRUE	OK	263.4	0.00274	0.6851	0.9152	0.047	0.023	296.8	255.5	322.3	222.4	221.3	262.0
J079	chr11	3107945	3119546	TRUE	OK	220.0	0.00171	0.4505	0.8396	0.078	0.039	228.8	216.9	278.0	208.5	188.0	200.1
J080	chr11	3119631	3120420	TRUE	OK	234.8	0.00682	0.992	0.9979	-0.014	-0.007	232.7	225.2	335.4	215.4	200.8	199.2
J081	chr11	3119631	3120543	FALSE	LOW_COUNTS_INDEP_FILTER	7.9	0.113	0.5688	NA	NA	NA	11.8	5.2	12.1	4.0	2.0	12.6
J082	chr11	3119631	3121996	TRUE	OK	23.3	0.0297	0.5789	0.881	0.208	0.104	28.6	14.6	30.2	14.9	21.5	30.0
J083	chr11	3120624	3121996	TRUE	OK	304.6	0.00464	0.3354	0.8026	-0.133	-0.066	355.0	299.3	408.9	252.2	230.1	282.3
J084	chr11	3122098	3122347	TRUE	OK	352.0	0.00601	0.522	0.8629	-0.099	-0.049	436.8	332.6	447.2	300.8	277.1	317.1
J085	chr11	3122428	3126472	TRUE	OK	288.5	0.00323	0.1202	0.7161	0.181	0.090	318.5	258.6	343.5	277.0	263.4	269.7
J086	chr11	3126555	3129012	TRUE	OK	84.4	0.00336	0.0005106	0.09027	0.558	0.279	82.8	61.5	91.7	95.3	85.2	89.9
J087	chr11	3129169	3160917	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J088	chr11	3129169	3163939	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.254	0.3048	NA	NA	NA	0.0	1.0	1.0	0.0	0.0	0.0
J089	chr11	3129169	3165215	TRUE	OK	69.4	0.00451	5.944e-05	0.0215	0.729	0.364	53.2	60.5	68.5	73.5	91.1	69.6
J090	chr11	3129169	3165222	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.0496	0.01131	NA	NA	NA	3.0	0.0	0.0	5.0	2.9	3.9
J091	chr11	3129169	3165510	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J092	chr11	3129169	3166624	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J093	chr11	3146661	3165215	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000021762.20
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE