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Normalized Counts Table (ENSG00000013441.16)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr2	200853008	200853075	FALSE	LOW_COUNTS_INDEP_FILTER	3.8	0.0462	0.6223	NA	NA	NA	3.0	7.3	2.0	3.0	4.9	2.9
E002	chr2	200853075	200853076	FALSE	LOW_COUNTS_INDEP_FILTER	4.7	0.039	0.187	NA	NA	NA	4.9	9.4	3.0	3.0	4.9	2.9
E003	chr2	200853076	200853080	FALSE	LOW_COUNTS_INDEP_FILTER	4.7	0.039	0.187	NA	NA	NA	4.9	9.4	3.0	3.0	4.9	2.9
E004	chr2	200853080	200853081	TRUE	OK	11.7	0.0286	0.06906	0.6613	-0.819	-0.410	12.8	19.8	10.1	7.9	13.7	5.8
E005	chr2	200853081	200853097	TRUE	OK	24.9	0.0217	0.06803	0.6596	-0.647	-0.324	25.6	41.7	19.1	16.9	24.5	21.3
E006	chr2	200853097	200853112	TRUE	OK	26.7	0.0217	0.1133	0.7112	-0.563	-0.282	28.6	42.8	19.1	21.8	25.5	22.2
E007	chr2	200853112	200853195	TRUE	OK	213.4	0.0162	0.08027	0.6774	-0.429	-0.215	214.9	303.4	171.2	161.8	211.5	217.5
E008	chr2	200853195	200853246	TRUE	OK	295.1	0.0245	0.1708	0.7444	-0.426	-0.213	290.9	437.9	220.6	234.3	286.9	299.7
E009	chr2	200853246	200853331	TRUE	OK	439.5	0.0217	0.0977	0.6966	-0.461	-0.231	426.0	638.1	356.6	342.5	419.1	454.4
E010	chr2	200853331	200853449	TRUE	OK	600.2	0.0218	0.1237	0.719	-0.428	-0.214	588.6	843.6	478.4	477.5	589.5	623.6
E011	chr2	200853902	200853993	TRUE	OK	621.5	0.0117	0.1711	0.7445	-0.276	-0.138	601.5	778.9	514.7	512.3	664.0	657.4
E012	chr2	200853993	200853995	TRUE	OK	15.3	0.0298	0.3976	0.8231	-0.360	-0.180	11.8	22.9	14.1	13.9	19.6	9.7
E013	chr2	200853995	200854013	TRUE	OK	9.8	0.0479	0.8811	0.9714	-0.089	-0.044	4.9	15.6	8.1	6.9	14.7	8.7
E014	chr2	200854013	200854134	TRUE	OK	12.3	0.0499	0.6953	0.9184	0.156	0.078	3.9	17.7	11.1	10.9	15.7	14.5
E015	chr2	200854615	200854695	TRUE	OK	527.6	0.00665	0.4396	0.8361	-0.127	-0.063	520.6	595.4	426.1	466.6	567.0	589.8
E016	chr2	200854695	200854886	TRUE	OK	26.2	0.018	0.8748	0.9696	0.059	0.030	17.7	33.4	21.2	17.9	33.3	33.8
E017	chr2	200855003	200855086	TRUE	OK	493.4	0.00296	0.07338	0.6681	-0.199	-0.100	492.0	526.6	456.3	451.7	530.8	502.8
E018	chr2	200856681	200856811	TRUE	OK	566.3	0.00281	0.09921	0.6971	-0.175	-0.088	538.4	602.7	537.9	507.3	621.8	589.8
E019	chr2	200856890	200856985	TRUE	OK	506.6	0.00239	0.0941	0.6926	-0.172	-0.086	498.9	514.1	488.5	467.6	537.6	532.7
E020	chr2	200856985	200857717	TRUE	OK	70.9	0.00421	0.418	0.8295	-0.138	-0.069	74.0	61.5	73.5	53.6	86.2	76.4
E021	chr2	200857717	200857884	TRUE	OK	720.2	0.0027	0.4004	0.8242	-0.091	-0.046	768.1	670.5	639.6	656.2	782.4	804.4
E022	chr2	200857972	200858089	TRUE	OK	793.1	0.0031	0.3621	0.8114	-0.104	-0.052	854.9	742.4	698.0	720.8	863.7	878.9
E023	chr2	200858089	200858166	TRUE	OK	15.4	0.0104	0.01784	0.4746	0.843	0.421	8.9	12.5	9.1	18.9	20.6	22.2
E024	chr2	200859679	200859746	TRUE	OK	610.5	0.00126	0.7054	0.9214	-0.031	-0.015	616.3	565.2	549.9	545.0	716.8	670.0
E025	chr2	200859746	200859747	TRUE	OK	151.1	0.00378	0.02883	0.5468	0.324	0.162	120.3	128.3	127.9	126.1	204.7	199.2
E026	chr2	200859747	200860124	TRUE	OK	353.9	0.0121	0.1928	0.7548	0.283	0.141	308.6	262.8	329.4	272.0	463.2	487.3
E027	chr2	200860124	200860215	TRUE	OK	512.0	0.002	0.6115	0.8916	-0.043	-0.022	516.7	457.8	483.5	425.9	588.5	599.4
E028	chr2	200860215	200860964	TRUE	OK	528.0	0.0182	0.0987	0.6968	0.397	0.199	497.9	332.6	467.4	429.9	709.0	730.9
E029	chr2	200860964	200860983	TRUE	OK	124.8	0.0247	0.2299	0.7691	0.366	0.183	116.3	71.9	116.8	90.3	168.4	184.7
E030	chr2	200860983	200861089	TRUE	OK	197.8	0.0204	0.1375	0.7279	0.407	0.203	177.5	121.0	179.3	147.9	274.2	287.2
E031	chr2	200861089	200861237	TRUE	OK	166.3	0.0117	0.137	0.7277	0.311	0.156	155.8	107.4	153.1	138.0	227.2	216.6
E032	chr2	200861237	200861331	TRUE	OK	555.1	0.00722	0.7204	0.9262	-0.070	-0.035	599.5	473.4	520.7	548.0	595.4	593.6
E033	chr2	200861331	200861466	TRUE	OK	631.2	0.0132	0.2326	0.7701	0.213	0.107	643.9	445.2	568.1	660.2	709.0	760.9
E034	chr2	200861466	200861701	TRUE	OK	22.1	0.0346	0.6709	0.9106	0.121	0.061	31.6	14.6	13.1	23.8	29.4	20.3
E035	chr2	200861701	200861862	TRUE	OK	522.7	0.0123	0.05387	0.6347	0.350	0.175	514.7	346.2	445.2	553.0	616.0	661.3
E036	chr2	200864100	200864252	TRUE	OK	14.3	0.0154	0.2579	0.7783	0.413	0.207	17.7	9.4	7.1	15.9	18.6	17.4
E037	chr2	200864252	200864561	TRUE	OK	20.3	0.00941	0.0972	0.6963	0.516	0.258	16.8	10.4	19.1	21.8	26.4	27.1
E038	chr2	200864563	200864656	TRUE	OK	157.7	0.00362	7.618e-05	0.02571	0.552	0.276	133.1	99.1	125.9	165.8	212.5	209.8
E039	chr2	200864656	200864657	TRUE	OK	26.1	0.00762	0.03178	0.5601	0.599	0.300	22.7	16.7	18.1	26.8	41.1	30.9
E040	chr2	200864657	200864658	TRUE	OK	24.6	0.00785	0.07542	0.6713	0.505	0.253	22.7	16.7	17.1	25.8	37.2	28.0
E041	chr2	200864658	200864662	TRUE	OK	21.8	0.0114	0.2041	0.7594	0.395	0.197	21.7	13.6	17.1	23.8	33.3	21.3
E042	chr2	200864662	200864691	TRUE	OK	20.0	0.0105	0.2343	0.7706	0.377	0.189	18.7	13.6	16.1	21.8	30.4	19.3
E043	chr2	200864691	200864744	FALSE	LOW_COUNTS_INDEP_FILTER	3.6	0.0908	0.8483	NA	NA	NA	6.9	0.0	4.0	3.0	3.9	3.9
J044	chr2	200853449	200853902	TRUE	OK	411.1	0.0163	0.1782	0.7483	-0.330	-0.165	390.5	555.8	334.4	334.6	420.1	431.2
J045	chr2	200853993	200854615	TRUE	OK	344.0	0.0105	0.5749	0.8798	-0.123	-0.061	344.1	403.5	258.9	302.8	357.4	397.4
J046	chr2	200854695	200855003	TRUE	OK	361.6	0.00139	0.3005	0.7917	-0.097	-0.049	368.8	367.0	313.2	330.6	395.6	394.5
J047	chr2	200854695	200856681	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.557	0.621	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
J048	chr2	200855086	200856681	TRUE	OK	344.7	0.00243	0.02038	0.4954	-0.247	-0.124	334.3	386.8	328.4	292.9	380.0	346.1
J049	chr2	200856811	200856890	TRUE	OK	329.5	0.00493	0.26	0.7792	-0.162	-0.081	301.7	350.4	324.3	315.7	343.7	341.3
J050	chr2	200856985	200857717	TRUE	OK	307.9	0.00118	0.8518	0.9638	-0.019	-0.010	307.6	289.9	273.0	285.9	336.9	353.9
J051	chr2	200857884	200857972	TRUE	OK	461.4	0.00608	0.4783	0.8489	-0.110	-0.055	528.5	412.9	400.9	404.1	476.9	545.3
J052	chr2	200858089	200859679	TRUE	OK	486.3	0.00122	0.6552	0.9061	-0.040	-0.020	499.9	441.1	442.2	445.8	554.3	534.7
J053	chr2	200859746	200860124	TRUE	OK	203.6	0.00299	0.004113	0.271	-0.365	-0.182	234.7	214.8	195.4	182.7	207.6	186.6
J054	chr2	200859746	200861237	TRUE	OK	57.8	0.0167	0.9362	0.985	-0.032	-0.016	48.3	58.4	57.4	70.5	55.8	56.1
J055	chr2	200859747	200861237	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J056	chr2	200860215	200861237	TRUE	OK	170.6	0.00825	0.01768	0.4734	-0.432	-0.216	190.3	189.8	172.2	165.8	160.6	145.0
J057	chr2	200861466	200861701	TRUE	OK	406.2	0.0179	0.1273	0.7217	0.327	0.163	413.1	256.5	349.5	433.8	448.5	535.6
J058	chr2	200861466	200864563	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J059	chr2	200861862	200864100	FALSE	LOW_COUNTS_INDEP_FILTER	4.5	0.112	0.8017	NA	NA	NA	3.9	8.3	0.0	4.0	4.9	5.8
J060	chr2	200861862	200864563	TRUE	OK	152.1	0.00222	7.225e-06	0.004227	0.568	0.284	127.2	97.0	118.9	162.8	204.7	202.1
N061	chr2	200856985	200857972	TRUE	OK	13.9	0.00979	0.0002092	0.05119	-1.368	-0.684	17.7	25.0	15.1	6.9	10.8	7.7

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000013441.16
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE