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Normalized Counts Table (ENSG00000008441.16)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr19	12995607	12995837	TRUE	OK	81.4	0.0383	0.2423	0.7729	-0.346	-0.173	106.5	69.9	97.7	88.4	91.1	34.8
E002	chr19	12995837	12995864	TRUE	OK	104.4	0.0144	0.9252	0.9824	0.022	0.011	120.3	70.9	120.9	119.1	122.4	72.5
E003	chr19	13012187	13012206	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E004	chr19	13012206	13012266	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E005	chr19	13023990	13024031	TRUE	OK	26.0	0.00854	2.749e-06	0.001945	1.350	0.675	16.8	7.3	20.1	42.7	33.3	35.8
E006	chr19	13024031	13024034	TRUE	OK	26.6	0.00774	7.151e-07	0.0006364	1.400	0.700	16.8	7.3	20.1	42.7	36.2	36.7
E007	chr19	13024579	13024580	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.225	0.396	NA	NA	NA	0.0	1.0	0.0	1.0	0.0	1.9
E008	chr19	13024580	13024584	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.225	0.396	NA	NA	NA	0.0	1.0	0.0	1.0	0.0	1.9
E009	chr19	13024584	13024612	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.103	0.2113	NA	NA	NA	0.0	1.0	1.0	1.0	2.9	1.9
E010	chr19	13024612	13024626	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.148	0.3494	NA	NA	NA	0.0	1.0	1.0	0.0	2.9	1.9
E011	chr19	13024626	13024680	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.207	0.3341	NA	NA	NA	1.0	1.0	1.0	0.0	5.9	1.9
E012	chr19	13024680	13024682	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.414	0.94	NA	NA	NA	1.0	1.0	1.0	0.0	4.9	0.0
E013	chr19	13024682	13024684	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.571	0.773	NA	NA	NA	0.0	1.0	1.0	0.0	4.9	0.0
E014	chr19	13024684	13024719	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.315	0.4042	NA	NA	NA	0.0	1.0	1.0	1.0	4.9	0.0
E015	chr19	13024719	13024723	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.169	0.1955	NA	NA	NA	0.0	1.0	1.0	1.0	4.9	1.0
E016	chr19	13024938	13025020	FALSE	LOW_COUNTS_INDEP_FILTER	5.3	0.0395	0.559	NA	NA	NA	5.9	1.0	7.1	6.9	7.8	2.9
E017	chr19	13025020	13025368	TRUE	OK	665.7	0.00832	0.6437	0.9022	0.040	0.020	753.3	433.8	795.7	665.2	711.9	634.2
E018	chr19	13025368	13025495	TRUE	OK	587.4	0.00639	0.7538	0.9364	0.017	0.008	712.9	399.4	649.7	601.6	567.0	593.6
E019	chr19	13025495	13025510	TRUE	OK	424.3	0.00773	0.7899	0.947	0.012	0.006	529.5	284.7	460.3	428.9	402.5	439.9
E020	chr19	13025510	13025520	TRUE	OK	435.0	0.00744	0.6353	0.8995	0.043	0.021	532.4	286.7	474.4	434.8	428.9	452.5
E021	chr19	13025520	13025552	TRUE	OK	460.3	0.00676	0.651	0.9048	0.040	0.020	553.2	308.6	508.6	447.7	462.2	481.5
E022	chr19	13070002	13070069	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E023	chr19	13073046	13073109	TRUE	OK	593.3	0.00988	0.2153	0.7633	0.176	0.088	684.3	360.8	645.6	632.4	594.4	642.0
E024	chr19	13073421	13073496	TRUE	OK	512.2	0.0126	0.09483	0.6936	0.285	0.142	597.5	295.1	512.7	606.6	501.4	559.8
E025	chr19	13073905	13074019	TRUE	OK	457.8	0.0225	0.08966	0.6889	0.359	0.180	549.2	221.1	452.2	540.1	465.2	519.2
E026	chr19	13074019	13074026	TRUE	OK	254.4	0.0241	0.0598	0.6477	0.435	0.217	304.7	116.8	235.7	314.7	252.7	301.7
E027	chr19	13075534	13075671	TRUE	OK	465.0	0.00801	0.1275	0.7218	0.211	0.106	549.2	287.8	470.4	528.2	474.0	480.5
E028	chr19	13078612	13078735	TRUE	OK	383.2	0.00206	0.1027	0.7006	0.149	0.075	426.0	269.0	403.9	402.1	419.1	379.0
E029	chr19	13081679	13081835	TRUE	OK	601.1	0.00273	0.5724	0.879	0.042	0.021	698.1	433.8	656.7	613.5	605.2	599.4
E030	chr19	13081835	13081855	TRUE	OK	429.0	0.00485	0.674	0.9116	0.032	0.016	505.8	293.0	481.5	437.8	423.0	433.1
E031	chr19	13087988	13088136	TRUE	OK	27.7	0.0432	0.09543	0.6944	0.606	0.303	18.7	9.4	38.3	36.7	36.2	27.1
E032	chr19	13090298	13090390	TRUE	OK	547.6	0.00246	0.2485	0.7751	0.101	0.050	624.1	391.0	583.2	594.7	555.3	537.6
E033	chr19	13094634	13094649	TRUE	OK	392.6	0.00323	0.3647	0.812	0.092	0.046	442.7	282.6	423.0	435.8	374.1	397.4
E034	chr19	13094649	13094684	TRUE	OK	444.8	0.00435	0.4528	0.8404	0.081	0.040	524.6	319.1	462.3	505.3	428.9	428.3
E035	chr19	13094684	13094755	TRUE	OK	467.4	0.00819	0.1061	0.7038	0.224	0.112	545.3	281.5	481.5	510.3	498.5	487.3
E036	chr19	13094755	13094758	TRUE	OK	347.8	0.0145	0.1044	0.7019	0.286	0.143	425.0	186.6	339.4	390.2	380.9	364.5
E037	chr19	13094758	13094770	TRUE	OK	383.2	0.0142	0.06808	0.6596	0.324	0.162	460.5	204.4	369.7	434.8	425.0	405.1
E038	chr19	13094770	13094985	TRUE	OK	629.5	0.00994	0.09147	0.6905	0.253	0.126	746.4	378.5	624.5	694.0	653.2	680.7
E039	chr19	13094985	13096201	TRUE	OK	1646.7	0.00138	0.8112	0.9529	-0.023	-0.012	1883.3	1301.3	1812.0	1709.6	1606.0	1568.2
E040	chr19	13096201	13098687	TRUE	OK	2752.5	0.00999	0.171	0.7444	-0.203	-0.102	2954.1	2697.5	2988.4	2691.5	2664.6	2518.6
E041	chr19	13098687	13098766	TRUE	OK	56.2	0.0431	0.3856	0.8188	-0.319	-0.160	52.3	83.4	52.4	65.5	40.2	43.5
E042	chr19	13098766	13098796	TRUE	OK	11.0	0.0394	0.6299	0.8976	-0.206	-0.103	8.9	14.6	12.1	14.9	5.9	9.7
J043	chr19	12995864	13025020	TRUE	OK	101.0	0.0132	0.7786	0.944	0.062	0.031	111.4	67.8	118.9	118.1	117.5	72.5
J044	chr19	13012266	13025020	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J045	chr19	13024034	13025020	TRUE	OK	26.6	0.0054	2.287e-07	0.0002461	1.400	0.700	16.8	7.3	20.1	42.7	36.2	36.7
J046	chr19	13024680	13025020	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.56	0.5731	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J047	chr19	13024682	13025020	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.558	0.5553	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
J048	chr19	13024684	13025020	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J049	chr19	13024719	13025020	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J050	chr19	13024723	13025020	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.565	0.5718	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.0
J051	chr19	13025368	13073046	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.556	0.5721	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
J052	chr19	13025552	13073046	TRUE	OK	420.5	0.00542	0.5726	0.8791	0.053	0.027	487.1	283.6	475.4	409.0	428.9	438.9
J053	chr19	13070069	13073046	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J054	chr19	13073109	13073421	TRUE	OK	401.8	0.00972	0.1289	0.7227	0.233	0.116	460.5	240.9	419.0	455.7	390.7	443.8
J055	chr19	13073496	13073905	TRUE	OK	336.5	0.0208	0.07104	0.6646	0.385	0.193	399.3	165.8	322.3	405.1	335.9	390.6
J056	chr19	13074026	13075534	TRUE	OK	235.4	0.0247	0.08673	0.6855	0.396	0.198	285.9	109.5	221.6	290.9	232.1	272.6
J057	chr19	13075671	13078612	TRUE	OK	257.0	0.00105	0.3626	0.8114	0.079	0.040	278.1	195.0	281.0	274.0	267.3	246.5
J058	chr19	13075671	13081679	TRUE	OK	33.0	0.00661	0.2699	0.7823	0.262	0.131	40.4	21.9	28.2	29.8	38.2	39.6
J059	chr19	13078735	13081679	TRUE	OK	224.9	0.00266	0.1462	0.7331	0.157	0.078	256.4	150.2	235.7	231.3	237.0	238.8
J060	chr19	13081855	13087988	TRUE	OK	12.6	0.05	0.5692	0.8778	0.203	0.102	9.9	4.2	21.2	15.9	13.7	10.6
J061	chr19	13081855	13090298	TRUE	OK	382.6	0.00263	0.5151	0.8608	0.054	0.027	444.7	271.1	417.0	392.2	379.0	391.6
J062	chr19	13088136	13090298	TRUE	OK	17.0	0.0186	0.01183	0.4137	0.933	0.467	11.8	6.3	17.1	24.8	27.4	14.5
J063	chr19	13090390	13094634	TRUE	OK	372.7	0.00215	0.2218	0.7654	0.113	0.057	417.1	271.1	393.8	414.0	359.4	380.9
J064	chr19	13094985	13098687	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
N065	chr19	13037502	13073046	TRUE	OK	45.9	0.00957	0.07917	0.6758	0.394	0.197	51.3	20.9	47.3	51.6	48.0	56.1

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000008441.16
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE