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| binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
| MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
| E001 | chr8 | 17296793 | 17300224 | TRUE | OK | 516.2 | 0.00377 | 6.975e-12 | 2.696e-08 | -1.410 | -0.690 | 500.9 | 479.7 | 522.7 | 555.0 | 503.3 | 535.6 |
| E002 | chr8 | 17301650 | 17302153 | TRUE | OK | 11.1 | 0.016 | 0.2475 | 0.7748 | -0.482 | -0.241 | 14.8 | 10.4 | 11.1 | 6.9 | 11.8 | 11.6 |
| E003 | chr8 | 17302153 | 17302201 | TRUE | OK | 9.9 | 0.0227 | 0.2457 | 0.7741 | 0.538 | 0.269 | 6.9 | 9.4 | 6.0 | 7.9 | 13.7 | 15.5 |
| E004 | chr8 | 17302201 | 17302280 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.5 | 0.0205 | 0.007667 | NA | NA | NA | 5.9 | 5.2 | 4.0 | 9.9 | 14.7 | 17.4 |
| E005 | chr8 | 17304378 | 17304438 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.9 | 0.0235 | 5.698e-05 | NA | NA | NA | 3.0 | 1.0 | 3.0 | 10.9 | 16.6 | 12.6 |
| E006 | chr8 | 17304438 | 17304519 | TRUE | OK | 10.5 | 0.0163 | 6.289e-06 | 0.003761 | 2.208 | 1.104 | 3.0 | 3.1 | 4.0 | 14.9 | 19.6 | 18.4 |
| E007 | chr8 | 17305756 | 17305957 | TRUE | OK | 13.3 | 0.0125 | 5.288e-06 | 0.003296 | 1.918 | 0.959 | 3.9 | 5.2 | 6.0 | 24.8 | 21.5 | 18.4 |
| E008 | chr8 | 17309276 | 17309326 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.5 | 0.0227 | 3.263e-06 | NA | NA | NA | 0.0 | 3.1 | 3.0 | 11.9 | 16.6 | 16.4 |
| E009 | chr8 | 17311510 | 17311636 | TRUE | OK | 11.1 | 0.0142 | 1.244e-08 | 1.967e-05 | 2.907 | 1.454 | 3.0 | 2.1 | 2.0 | 21.8 | 16.6 | 21.3 |
| E010 | chr8 | 17311636 | 17311673 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.394 | 0.916 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 |
| E011 | chr8 | 17311752 | 17311863 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.842 | 0.5301 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
| E012 | chr8 | 17313291 | 17313384 | TRUE | OK | 11.1 | 0.017 | 4.473e-09 | 8.035e-06 | 3.155 | 1.577 | 2.0 | 2.1 | 2.0 | 24.8 | 14.7 | 21.3 |
| E013 | chr8 | 17313384 | 17313401 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.2 | 0.0213 | 1.055e-05 | NA | NA | NA | 2.0 | 1.0 | 2.0 | 13.9 | 9.8 | 14.5 |
| E014 | chr8 | 17326316 | 17326513 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.0834 | 0.06335 | NA | NA | NA | 0.0 | 2.1 | 0.0 | 5.0 | 2.9 | 1.9 |
| E015 | chr8 | 17331149 | 17331199 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.2 | 0.0508 | 3.033e-05 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 10.9 | 4.9 | 13.5 |
| E016 | chr8 | 17331199 | 17331282 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.2 | 0.034 | 0.0794 | NA | NA | NA | 3.9 | 1.0 | 4.0 | 6.9 | 4.9 | 10.6 |
| E017 | chr8 | 17338729 | 17338991 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.071 | 0.4901 | NA | NA | NA | 3.9 | 0.0 | 1.0 | 3.0 | 2.9 | 2.9 |
| E018 | chr8 | 17341362 | 17341497 | TRUE | OK | 13.8 | 0.0555 | 0.02409 | 0.5198 | 1.183 | 0.592 | 9.9 | 2.1 | 11.1 | 28.8 | 17.6 | 13.5 |
| E019 | chr8 | 17346013 | 17346159 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.0838 | 0.9785 | NA | NA | NA | 2.0 | 0.0 | 3.0 | 3.0 | 2.0 | 1.0 |
| E020 | chr8 | 17348952 | 17349057 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.2 | 0.0271 | 0.002884 | NA | NA | NA | 6.9 | 0.0 | 4.0 | 14.9 | 12.7 | 10.6 |
| E021 | chr8 | 17349057 | 17349081 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.9 | 0.0388 | 0.0002948 | NA | NA | NA | 0.0 | 0.0 | 2.0 | 6.0 | 7.8 | 7.7 |
| E022 | chr8 | 17349168 | 17349237 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.148 | 0.02501 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 2.0 | 2.9 | 1.0 |
| E023 | chr8 | 17349292 | 17349485 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.0622 | 0.003885 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 5.0 | 4.9 | 2.9 |
| E024 | chr8 | 17361116 | 17361274 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.85 | 0.6733 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
| E025 | chr8 | 17371036 | 17371199 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E026 | chr8 | 17372994 | 17373117 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E027 | chr8 | 17373117 | 17373240 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E028 | chr8 | 17413268 | 17413307 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E029 | chr8 | 17413307 | 17413327 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E030 | chr8 | 17413327 | 17413351 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E031 | chr8 | 17413351 | 17413528 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J032 | chr8 | 17300224 | 17302153 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.8 | 0.0287 | 0.02929 | NA | NA | NA | 2.0 | 2.1 | 1.0 | 4.0 | 7.8 | 5.8 |
| J033 | chr8 | 17302280 | 17304378 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.1 | 0.0199 | 5.861e-06 | NA | NA | NA | 0.0 | 0.0 | 2.0 | 8.9 | 8.8 | 10.6 |
| J034 | chr8 | 17304519 | 17305756 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.9 | 0.0175 | 0.0002889 | NA | NA | NA | 1.0 | 2.1 | 4.0 | 11.9 | 13.7 | 8.7 |
| J035 | chr8 | 17305957 | 17309276 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.4 | 0.0162 | 0.0002083 | NA | NA | NA | 0.0 | 3.1 | 3.0 | 10.9 | 9.8 | 11.6 |
| J036 | chr8 | 17305957 | 17311510 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.596 | 0.4193 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 |
| J037 | chr8 | 17309326 | 17311510 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.6 | 0.0322 | 4.296e-06 | NA | NA | NA | 0.0 | 2.1 | 0.0 | 6.9 | 10.8 | 13.5 |
| J038 | chr8 | 17311636 | 17311752 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J039 | chr8 | 17311636 | 17313291 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.4 | 0.0151 | 6.02e-07 | NA | NA | NA | 2.0 | 1.0 | 1.0 | 15.9 | 9.8 | 14.5 |
| J040 | chr8 | 17313401 | 17331149 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.9 | 0.057 | 0.000728 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 5.0 | 2.9 | 8.7 |
| J041 | chr8 | 17326513 | 17331149 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.252 | 0.1018 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 3.0 | 0.0 | 1.0 |
| J042 | chr8 | 17331282 | 17341362 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.0348 | 0.7341 | NA | NA | NA | 2.0 | 1.0 | 4.0 | 4.0 | 2.0 | 3.9 |
| J043 | chr8 | 17338991 | 17341362 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J044 | chr8 | 17341497 | 17346013 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.0876 | 0.3941 | NA | NA | NA | 2.0 | 0.0 | 3.0 | 2.0 | 0.0 | 1.0 |
| J045 | chr8 | 17341497 | 17348952 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.6 | 0.0521 | 0.05934 | NA | NA | NA | 6.9 | 0.0 | 4.0 | 12.9 | 7.8 | 7.7 |
| J046 | chr8 | 17346159 | 17348952 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J047 | chr8 | 17349081 | 17349168 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.106 | 0.03682 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 2.0 | 2.0 | 1.0 |
| J048 | chr8 | 17349081 | 17349292 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.193 | 0.05078 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 2.0 | 2.9 |
| J049 | chr8 | 17349081 | 17361116 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.556 | 0.6403 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
| J050 | chr8 | 17349081 | 17371036 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J051 | chr8 | 17361274 | 17371036 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J052 | chr8 | 17371199 | 17373117 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J053 | chr8 | 17373240 | 17413268 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| N054 | chr8 | 17296412 | 17298066 | TRUE | OK | 12.2 | 0.0544 | 0.4326 | 0.8337 | -0.420 | -0.210 | 13.8 | 6.3 | 19.1 | 11.9 | 5.9 | 16.4 |
| Color Codes | |||||
|---|---|---|---|---|---|
| NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
| Gene ENSG00000003987.14 | |||||||
|---|---|---|---|---|---|---|---|
| expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
| PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
| TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |