Raw Counts Table (ENSG00000003436.16)
binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Raw Counts |
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 |
E001 | chr2 | 187464229 | 187467001 | TRUE | OK | 1489.6 | 0.00493 | 0.06039 | 0.6489 | 0.235 | 0.117 | 947.0 | 949.0 | 849.0 | 2113.0 | 1989.0 | 2186.0 |
E002 | chr2 | 187467001 | 187467042 | TRUE | OK | 252.9 | 0.00227 | 0.9917 | 0.9979 | 0.002 | 0.001 | 177.0 | 158.0 | 161.0 | 356.0 | 310.0 | 371.0 |
E003 | chr2 | 187467752 | 187467874 | TRUE | OK | 518.3 | 0.00172 | 0.2095 | 0.7612 | -0.115 | -0.057 | 387.0 | 341.0 | 336.0 | 685.0 | 657.0 | 735.0 |
E004 | chr2 | 187467874 | 187467932 | TRUE | OK | 533.2 | 0.00153 | 0.3714 | 0.8139 | -0.080 | -0.040 | 398.0 | 341.0 | 341.0 | 709.0 | 696.0 | 747.0 |
E005 | chr2 | 187478577 | 187478584 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.3 | 0.0906 | 0.04867 | NA | NA | NA | 7.0 | 3.0 | 2.0 | 2.0 | 5.0 | 1.0 |
E006 | chr2 | 187478584 | 187478803 | TRUE | OK | 30.7 | 0.0162 | 1.044e-07 | 0.0001252 | -1.619 | -0.810 | 37.0 | 46.0 | 26.0 | 29.0 | 23.0 | 23.0 |
E007 | chr2 | 187483929 | 187484123 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.392 | 0.5454 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 | 0.0 |
E008 | chr2 | 187484123 | 187484216 | TRUE | OK | 647.3 | 0.00141 | 0.01656 | 0.464 | -0.200 | -0.100 | 501.0 | 425.0 | 442.0 | 837.0 | 843.0 | 874.0 |
E009 | chr2 | 187484216 | 187484810 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.208 | 0.4301 | NA | NA | NA | 0.0 | 0.0 | 2.0 | 2.0 | 1.0 | 6.0 |
E010 | chr2 | 187484810 | 187484987 | TRUE | OK | 750.6 | 0.00131 | 0.01055 | 0.3995 | -0.203 | -0.102 | 570.0 | 475.0 | 539.0 | 999.0 | 950.0 | 1015.0 |
E011 | chr2 | 187488336 | 187488375 | TRUE | OK | 459.4 | 0.00236 | 0.1828 | 0.7501 | -0.136 | -0.068 | 330.0 | 283.0 | 339.0 | 631.0 | 559.0 | 642.0 |
E012 | chr2 | 187496880 | 187496883 | TRUE | OK | 400.0 | 0.00297 | 0.08077 | 0.6781 | -0.194 | -0.097 | 294.0 | 255.0 | 300.0 | 555.0 | 469.0 | 550.0 |
E013 | chr2 | 187496883 | 187496971 | TRUE | OK | 529.5 | 0.00206 | 0.009889 | 0.3902 | -0.246 | -0.123 | 411.0 | 343.0 | 388.0 | 733.0 | 636.0 | 696.0 |
E014 | chr2 | 187496971 | 187496976 | TRUE | OK | 357.2 | 0.00183 | 0.002892 | 0.2304 | -0.296 | -0.148 | 293.0 | 233.0 | 264.0 | 480.0 | 437.0 | 456.0 |
E015 | chr2 | 187496976 | 187497015 | TRUE | OK | 387.6 | 0.00243 | 0.01136 | 0.4091 | -0.270 | -0.135 | 313.0 | 239.0 | 296.0 | 516.0 | 481.0 | 503.0 |
E016 | chr2 | 187497015 | 187497078 | TRUE | OK | 413.8 | 0.0073 | 0.2757 | 0.7835 | -0.181 | -0.090 | 325.0 | 225.0 | 325.0 | 553.0 | 522.0 | 559.0 |
E017 | chr2 | 187503647 | 187503770 | TRUE | OK | 511.8 | 0.00867 | 0.9683 | 0.9925 | -0.019 | -0.010 | 391.0 | 257.0 | 367.0 | 710.0 | 671.0 | 709.0 |
E018 | chr2 | 187513615 | 187513641 | TRUE | OK | 100.5 | 0.00257 | 0.3954 | 0.8223 | -0.129 | -0.065 | 73.0 | 63.0 | 73.0 | 137.0 | 130.0 | 133.0 |
E019 | chr2 | 187513641 | 187513646 | TRUE | OK | 92.4 | 0.00333 | 0.7437 | 0.9336 | -0.055 | -0.027 | 72.0 | 51.0 | 63.0 | 133.0 | 121.0 | 120.0 |
E020 | chr2 | 187513646 | 187513653 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.1 | 0.12 | 0.6302 | NA | NA | NA | 4.0 | 0.0 | 6.0 | 6.0 | 6.0 | 15.0 |
E021 | chr2 | 187513653 | 187519860 | TRUE | OK | 68.0 | 0.0102 | 0.1382 | 0.7287 | 0.336 | 0.168 | 35.0 | 28.0 | 51.0 | 92.0 | 97.0 | 110.0 |
E022 | chr2 | 187520541 | 187520613 | TRUE | OK | 73.4 | 0.0116 | 0.2772 | 0.7839 | -0.260 | -0.130 | 65.0 | 36.0 | 61.0 | 106.0 | 93.0 | 84.0 |
E023 | chr2 | 187529363 | 187529485 | TRUE | OK | 133.5 | 0.00478 | 0.5391 | 0.8686 | -0.099 | -0.049 | 100.0 | 74.0 | 100.0 | 194.0 | 180.0 | 161.0 |
E024 | chr2 | 187544503 | 187544637 | TRUE | OK | 14.0 | 0.0214 | 0.9228 | 0.9819 | -0.037 | -0.018 | 13.0 | 8.0 | 7.0 | 14.0 | 17.0 | 26.0 |
E025 | chr2 | 187554199 | 187554349 | TRUE | OK | 527.1 | 0.00722 | 0.5237 | 0.8633 | 0.090 | 0.045 | 385.0 | 262.0 | 354.0 | 774.0 | 717.0 | 706.0 |
E026 | chr2 | 187554349 | 187554351 | TRUE | OK | 300.4 | 0.00252 | 0.3707 | 0.8137 | 0.099 | 0.050 | 214.0 | 157.0 | 195.0 | 432.0 | 395.0 | 430.0 |
E027 | chr2 | 187554351 | 187554431 | TRUE | OK | 305.8 | 0.00174 | 0.587 | 0.8837 | 0.055 | 0.027 | 215.0 | 171.0 | 201.0 | 437.0 | 400.0 | 431.0 |
E028 | chr2 | 187554431 | 187554435 | TRUE | OK | 50.2 | 0.00408 | 0.0006633 | 0.1046 | 0.749 | 0.375 | 25.0 | 21.0 | 22.0 | 81.0 | 78.0 | 78.0 |
E029 | chr2 | 187554435 | 187554438 | TRUE | OK | 38.6 | 0.00528 | 0.01209 | 0.4158 | 0.621 | 0.310 | 20.0 | 18.0 | 18.0 | 55.0 | 62.0 | 62.0 |
E030 | chr2 | 187554438 | 187554461 | TRUE | OK | 30.3 | 0.00707 | 0.08131 | 0.6786 | 0.485 | 0.242 | 15.0 | 16.0 | 16.0 | 39.0 | 48.0 | 50.0 |
E031 | chr2 | 187554461 | 187554492 | TRUE | OK | 15.0 | 0.0203 | 0.678 | 0.913 | 0.182 | 0.091 | 8.0 | 10.0 | 9.0 | 18.0 | 16.0 | 30.0 |
E032 | chr2 | 187565549 | 187565760 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.0487 | 0.2109 | NA | NA | NA | 1.0 | 0.0 | 2.0 | 5.0 | 5.0 | 4.0 |
J033 | chr2 | 187467042 | 187467752 | TRUE | OK | 215.3 | 0.00325 | 0.9748 | 0.9939 | 0.005 | 0.003 | 156.0 | 126.0 | 140.0 | 289.0 | 262.0 | 333.0 |
J034 | chr2 | 187467932 | 187484123 | TRUE | OK | 456.1 | 0.000841 | 0.2212 | 0.7651 | -0.098 | -0.049 | 338.0 | 293.0 | 300.0 | 607.0 | 604.0 | 622.0 |
J035 | chr2 | 187478803 | 187484123 | TRUE | OK | 27.8 | 0.0128 | 8.402e-08 | 0.0001057 | -1.583 | -0.792 | 35.0 | 40.0 | 23.0 | 27.0 | 21.0 | 21.0 |
J036 | chr2 | 187484216 | 187484810 | TRUE | OK | 435.6 | 0.00195 | 0.02941 | 0.5496 | -0.213 | -0.107 | 342.0 | 277.0 | 312.0 | 538.0 | 573.0 | 598.0 |
J037 | chr2 | 187484987 | 187488336 | TRUE | OK | 371.9 | 0.00238 | 0.4967 | 0.8546 | -0.071 | -0.036 | 265.0 | 223.0 | 264.0 | 529.0 | 447.0 | 526.0 |
J038 | chr2 | 187484987 | 187496880 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 1.01 | 0.6025 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 4.0 | 0.0 |
J039 | chr2 | 187488375 | 187496880 | TRUE | OK | 379.1 | 0.00232 | 0.06927 | 0.6614 | -0.188 | -0.094 | 275.0 | 246.0 | 282.0 | 531.0 | 443.0 | 519.0 |
J040 | chr2 | 187497078 | 187503647 | TRUE | OK | 313.4 | 0.0106 | 0.3587 | 0.8104 | -0.188 | -0.094 | 267.0 | 161.0 | 239.0 | 411.0 | 389.0 | 434.0 |
J041 | chr2 | 187503770 | 187513615 | TRUE | OK | 87.0 | 0.00199 | 0.3128 | 0.7951 | -0.155 | -0.078 | 64.0 | 55.0 | 64.0 | 118.0 | 107.0 | 119.0 |
J042 | chr2 | 187503770 | 187520541 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.4 | 0.0304 | 0.1994 | NA | NA | NA | 7.0 | 3.0 | 12.0 | 8.0 | 9.0 | 12.0 |
J043 | chr2 | 187503770 | 187529363 | TRUE | OK | 33.0 | 0.00813 | 0.6911 | 0.9171 | -0.106 | -0.053 | 23.0 | 16.0 | 29.0 | 40.0 | 39.0 | 53.0 |
J044 | chr2 | 187503770 | 187554199 | TRUE | OK | 177.6 | 0.0147 | 0.02986 | 0.5518 | 0.467 | 0.233 | 120.0 | 60.0 | 102.0 | 273.0 | 256.0 | 269.0 |
J045 | chr2 | 187513646 | 187520541 | TRUE | OK | 41.5 | 0.00471 | 0.371 | 0.8139 | -0.200 | -0.100 | 31.0 | 24.0 | 34.0 | 64.0 | 49.0 | 49.0 |
J046 | chr2 | 187513646 | 187554199 | TRUE | OK | 30.3 | 0.00954 | 0.9701 | 0.9928 | -0.013 | -0.007 | 27.0 | 15.0 | 18.0 | 46.0 | 45.0 | 33.0 |
J047 | chr2 | 187520613 | 187544503 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.145 | 0.08901 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 4.0 | 1.0 | 1.0 |
J048 | chr2 | 187520613 | 187554199 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.4 | 0.0232 | 0.8094 | NA | NA | NA | 6.0 | 1.0 | 3.0 | 9.0 | 5.0 | 9.0 |
J049 | chr2 | 187529485 | 187554199 | TRUE | OK | 84.2 | 0.0131 | 0.5791 | 0.8811 | 0.131 | 0.066 | 60.0 | 37.0 | 59.0 | 139.0 | 119.0 | 97.0 |
J050 | chr2 | 187544637 | 187554199 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.8 | 0.0226 | 0.824 | NA | NA | NA | 4.0 | 5.0 | 3.0 | 4.0 | 10.0 | 9.0 |
J051 | chr2 | 187554349 | 187565549 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.0445 | 0.3238 | NA | NA | NA | 1.0 | 0.0 | 2.0 | 5.0 | 5.0 | 2.0 |
N052 | chr2 | 187520618 | 187529363 | TRUE | OK | 13.4 | 0.0121 | 0.4337 | 0.834 | -0.297 | -0.148 | 12.0 | 9.0 | 9.0 | 21.0 | 19.0 | 11.0 |
N053 | chr2 | 187520618 | 187554199 | TRUE | OK | 21.3 | 0.00539 | 0.05932 | 0.6463 | -0.546 | -0.273 | 18.0 | 16.0 | 19.0 | 23.0 | 25.0 | 28.0 |
N054 | chr2 | 187554393 | 187554576 | TRUE | OK | 15.3 | 0.00741 | 0.005163 | 0.3002 | -0.942 | -0.471 | 13.0 | 17.0 | 14.0 | 16.0 | 14.0 | 18.0 |
Color Codes |
NO TEST
|
p > 0.05
|
p < 0.05
|
p < 0.005
|
p < 5e-04
|
p < 5e-05
|